RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZNF615Q8N8J6 731 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 C16orf52Q8NHV5 167 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 WDR36Q8NI36 951 aaKnown RBP23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF582Q96NG8 517 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-216ENST00000437340 DTX4Q9Y2E6 619 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 CDH10Q9Y6N8 788 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 KMT2EQ8IZD2 1858 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 CACNA1EQ15878 2313 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 EFCAB9A8MZ26 197 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 IGKV1D-16P01601 117 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 ADRA2AP08913 450 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 GNSP15586 552 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 SHBQ15464 509 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 DGUOKQ16854 277 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF829Q3KNS6 432 aaPredicted RBP23.77■■□□□ 1.4
CPNE1-216ENST00000437340 ZC3H14Q6PJT7 736 aaKnown RBP23.77■■□□□ 1.4
CPNE1-216ENST00000437340 CYP4Z2PQ8N1L4 340 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 RCBTB1Q8NDN9 531 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 OR4N2Q8NGD1 307 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM239Q8WW34 195 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 TBC1D23Q9NUY8 699 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 MED17Q9NVC6 651 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 MRPS18AQ9NVS2 196 aaKnown RBP23.77■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF223Q9UK11 482 aaPredicted RBP23.77■■□□□ 1.4
CPNE1-216ENST00000437340 ERGIC3Q9Y282 383 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 PCDH15Q96QU1 1955 aa23.77■■□□□ 1.4
CPNE1-216ENST00000437340 IRGMA1A4Y4 181 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 NPIPB9F8W1W9 429 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 AIREO43918 545 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 PIP5K1CO60331 668 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 CT45A8P0DMV1 189 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 CT45A9P0DMV2 189 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 GPR4P46093 362 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 LSM3P62310 102 aaKnown RBP23.76■■□□□ 1.39
CPNE1-216ENST00000437340 TMEM44Q2T9K0 475 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 CT45A2Q5DJT8 189 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 CMIPQ8IY22 773 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 NDNFQ8TB73 568 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 DYNC2LI1Q8TCX1 351 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 MAU2Q9Y6X3 613 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 LAMA1P25391 3075 aa23.76■■□□□ 1.39
CPNE1-216ENST00000437340 PRODHO43272 600 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 RPLP0P05388 317 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 CSF2RBP32927 897 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 UGT2B10P36537 528 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 RFX3P48380 749 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 SERPINB10P48595 397 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 RGS6P49758 472 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 PGDP52209 483 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 ATP12AP54707 1039 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 NCS1P62166 190 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 KLHL22Q53GT1 634 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 YOD1Q5VVQ6 348 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 GPR135Q8IZ08 494 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 Q8N9G6 341 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 OR1L3Q8NH93 324 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 CNOT9Q92600 299 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 RPL3LQ92901 407 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 HS6ST2Q96MM7 605 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 PTCHD1Q96NR3 888 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 MGLLQ99685 303 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 PILRBQ9UKJ0 227 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 CBLCQ9ULV8 474 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 DIMT1Q9UNQ2 313 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 TMEM5Q9Y2B1 443 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 OR2W5A6NFC9 320 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 FOXD2O60548 495 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 CLK1P49759 484 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 TUBA1BP68363 451 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 BNC1Q01954 994 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 PRKCDQ05655 676 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 QSOX2Q6ZRP7 698 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 TUBA1AQ71U36 451 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 BCDIN3DQ7Z5W3 292 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 BRIX1Q8TDN6 353 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 VMP1Q96GC9 406 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 TRIM2Q9C040 744 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 DNAJB12Q9NXW2 375 aaKnown RBP23.75■■□□□ 1.39
CPNE1-216ENST00000437340 TAS2R16Q9NYV7 291 aa23.75■■□□□ 1.39
CPNE1-216ENST00000437340 HYAL3O43820 417 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-216ENST00000437340 CLPSP04118 112 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 ALAS2P22557 587 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 DSG2Q14126 1118 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 FGFBP1Q14512 234 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 MED22Q15528 200 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 C19orf48Q6RUI8 117 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 WDR88Q6ZMY6 472 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 SLCO6A1Q86UG4 719 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 PROKR2Q8NFJ6 384 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 OIT3Q8WWZ8 545 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 BORCS5Q969J3 196 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 OR5M11Q96RB7 305 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 DUSP23Q9BVJ7 150 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 MND1Q9BWT6 205 aa23.74■■□□□ 1.39
CPNE1-216ENST00000437340 LSM2Q9Y333 95 aaKnown RBP23.74■■□□□ 1.39
CPNE1-216ENST00000437340 A0A0B4J2E0 115 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 A0A1B0GX12 115 aa23.73■■□□□ 1.39
CPNE1-216ENST00000437340 UNC119BA6NIH7 251 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms