RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 OTUD4Q01804 1114 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 PPIDQ08752 370 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 XRCC4Q13426 336 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TSTA3Q13630 321 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 IDI1Q13907 227 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 PDIA5Q14554 519 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 STK38Q15208 465 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TGIF1Q15583 401 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 AANATQ16613 207 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 Q3ZCU0 254 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ERICH5Q6P6B1 374 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 DEGS2Q6QHC5 323 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 AFTPHQ6ULP2 937 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 KDM7AQ6ZMT4 941 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 RBM43Q6ZSC3 357 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 MOB2Q70IA6 237 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ASPGQ86U10 573 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ITIH5Q86UX2 942 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 CLYBLQ8N0X4 340 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 CCNYQ8ND76 341 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 FAM46BQ96A09 425 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 KIAA1143Q96AT1 154 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 PANX2Q96RD6 677 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 JPH2Q9BR39 696 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 FRMD8P1Q9BZ68 369 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 MRPL37Q9BZE1 423 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 RIBC2Q9H4K1 309 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ZDHHC6Q9H6R6 413 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 KCNMB3Q9NPA1 279 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TECRQ9NZ01 308 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 EMC3Q9P0I2 261 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TRPC4Q9UBN4 977 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ATP6V1HQ9UI12 483 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 MRTO4Q9UKD2 239 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 ABCG2Q9UNQ0 655 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 MRPS2Q9Y399 296 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 LRRK1Q38SD2 2015 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GOLGA8OA6NCC3 632 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CFAP73A6NFT4 308 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ZNF716A6NP11 495 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 A8MX80 341 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ZNF879B4DU55 563 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 GOLGA8NF8WBI6 632 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 DUSP14O95147 198 aaKnown RBP2.3□□□□□ -2.04
CLK1-204ENST00000432425 CPNE6O95741 557 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CSTAP01040 98 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CHRNA1P02708 482 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ZNF735P0CB33 412 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CT45A8P0DMV1 189 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CT45A9P0DMV2 189 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CCDC192P0DO97 292 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 AREGP15514 252 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CD1EP15812 388 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 TUBG1P23258 451 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 SLC11A1P49279 550 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 STARP49675 285 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 TNFSF10P50591 281 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 SMSP52788 366 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ARPC4P59998 168 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 CDKL1Q00532 357 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 DR1Q01658 176 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 KDSRQ06136 332 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 DNAJC3Q13217 504 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 PDE7AQ13946 482 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 GIT2Q14161 759 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 PAN3Q58A45 887 aaKnown RBP2.3□□□□□ -2.04
CLK1-204ENST00000432425 CT45A2Q5DJT8 189 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 C10orf120Q5SQS8 335 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ATAD3BQ5T9A4 648 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 LIN9Q5TKA1 542 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 PRAMEF20Q5VT98 475 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 METAP1DQ6UB28 335 aaPredicted RBP2.3□□□□□ -2.04
CLK1-204ENST00000432425 PRSS42Q7Z5A4 293 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 TPRA1Q86W33 373 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 APOBEC3FQ8IUX4 373 aaKnown RBP2.3□□□□□ -2.04
CLK1-204ENST00000432425 Q8N9G6 341 aaPredicted RBP2.3□□□□□ -2.04
CLK1-204ENST00000432425 TMEM185AQ8NFB2 350 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 STARD8Q92502 1023 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 SLCO4A1Q96BD0 722 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 BIRC7Q96CA5 298 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 MSANTD3Q96H12 275 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 TSGA10Q9BZW7 698 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 IKZF5Q9H5V7 419 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 RMND5AQ9H871 391 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 TUBG2Q9NRH3 451 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 PLSCR3Q9NRY6 295 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 KLRF1Q9NZS2 232 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ATPIF1Q9UII2 106 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 KLHL21Q9UJP4 597 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 ATG4BQ9Y4P1 393 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.3□□□□□ -2.04
CLK1-204ENST00000432425 FGD5Q6ZNL6 1462 aa2.3□□□□□ -2.04
CLK1-204ENST00000432425 SBNO1A3KN83 1393 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 PLEKHG2Q9H7P9 1386 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 AFF2P51816 1311 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 WI2-2373I1.2A0A1W2PRP0 233 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 SH3PXD2BA1X283 911 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 HEATR9A2RTY3 570 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 PSMD3O43242 534 aa2.29□□□□□ -2.04
CLK1-204ENST00000432425 AKR7A2O43488 359 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms