RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TAF4O00268 1085 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 ARHGAP33O14559 1287 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CSO75390 466 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 PIAS2O75928 621 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 ENDOUP21128 410 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 DRD5P21918 477 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CD40LGP29965 261 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 S100A5P33763 92 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 GALNSP34059 522 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 PI4KAP42356 2102 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 MAZP56270 477 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 HNRNPKP61978 463 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDX56-204ENST00000431640 IGLV3-21P80748 117 aaPredicted RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 SLC13A2Q13183 592 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 EXOSC7Q15024 291 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 OR1Q1Q15612 314 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 INAQ16352 499 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 MINDY4Q4G0A6 757 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CCNJQ5T5M9 372 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 MRPL2Q5T653 305 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 RPL13AP3Q6NVV1 102 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 OGFOD3Q6PK18 319 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 ZBTB46Q86UZ6 589 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 C17orf82Q86X59 251 aaPredicted RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 NRMQ8IXM6 262 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 MINDY2Q8NBR6 621 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 OR52R1Q8NGF1 315 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 OR52I1Q8NGK6 324 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 PIK3R3Q92569 461 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 RIT1Q92963 219 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 ZNF285Q96NJ3 590 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CHCHD6Q9BRQ6 235 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 PELOQ9BRX2 385 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 PLA2G12AQ9BZM1 189 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 TMEM27Q9HBJ8 222 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 GALNT8Q9NY28 637 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CNIH4Q9P003 139 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 H2AFY2Q9P0M6 372 aaPredicted RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 CFL2Q9Y281 166 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 TMEM5Q9Y2B1 443 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 EXOSC1Q9Y3B2 195 aaKnown RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 CDH10Q9Y6N8 788 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CACNA1HO95180 2353 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 A0A0A6YYC8 382 aaPredicted RBP11.89□□□□□ -0.51
DDX56-204ENST00000431640 I3L1I5 382 aaPredicted RBP11.89□□□□□ -0.51
DDX56-204ENST00000431640 SULT1C4O75897 302 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 CBX7O95931 251 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 THY1P04216 161 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 CFIP05156 583 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 CT62P0C5K7 136 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 MPLP40238 635 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 MTNR1AP48039 350 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 PPP5CP53041 499 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 NUBP1P53384 320 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 EPHA4P54764 986 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 PSMD4P55036 377 aaKnown RBP11.89□□□□□ -0.51
DDX56-204ENST00000431640 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■■□□ 16.7
DDX56-204ENST00000431640 HOXC5Q00444 222 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 PRKCDQ05655 676 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ZNF155Q12901 538 aaPredicted RBP11.89□□□□□ -0.51
DDX56-204ENST00000431640 MAPK14Q16539 360 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ZNF613Q6PF04 617 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ATCAYQ86WG3 371 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 GRAMD2AQ8IUY3 354 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 SUMF1Q8NBK3 374 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 OR2T33Q8NG76 320 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 TMEM255BQ8WV15 326 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 RNFT2Q96EX2 444 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ZDHHC12Q96GR4 267 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 OPALINQ96PE5 141 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 CD180Q99467 661 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 MAP3K3Q99759 626 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ALOXE3Q9BYJ1 711 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ARRDC1-AS1Q9H2J1 176 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 DSN1Q9H410 356 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 PDE7BQ9NP56 450 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
DDX56-204ENST00000431640 FAM86C1Q9NVL1 165 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 TAS2R16Q9NYV7 291 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 PEX16Q9Y5Y5 336 aa11.89□□□□□ -0.51
DDX56-204ENST00000431640 TMEM129A0AVI4 362 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 UNC119BA6NIH7 251 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 LMO7DNF2Z398 122 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 H0YIG0 161 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 AQP9O43315 295 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 HCRTR1O43613 425 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 FOXS1O43638 330 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 KCNK2O95069 426 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 RCBTB2O95199 551 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ADRA2AP08913 450 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 S1PR1P21453 382 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 GRK5P34947 590 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 IDUAP35475 653 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 HSD17B7P56937 341 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ZNF45Q02386 682 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 DEFB110Q30KQ9 67 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 FLYWCH1Q4VC44 716 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms