RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 GRIN2DO15399 1336 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 GLI3P10071 1580 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 RRBP1Q9P2E9 1410 aaKnown RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZSCAN5BA6NJL1 495 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 SHISA9B4DS77 424 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 E9PQ18 207 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 K7ERI5 159 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 IGHV3-13P01766 116 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 MT-ND1P03886 318 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 FAM200BP0CF97 657 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 FOLR2P14207 255 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 PVRP15151 417 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 BCL3P20749 454 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TBXA2RP21731 343 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 OXTRP30559 389 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 DLSTP36957 453 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 VEGFCP49767 419 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 PPT1P50897 306 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC7A2P52569 658 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 METAP1P53582 386 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 CHIT1Q13231 466 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 SELPLGQ14242 412 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 RAB35Q15286 201 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 UBE2V2Q15819 145 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 PDK4Q16654 411 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 NHLRC3Q5JS37 347 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 BEND6Q5SZJ8 279 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 DCST2Q5T1A1 773 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 LEMD1Q68G75 181 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 PVRIGQ6DKI7 326 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TIPARPQ7Z3E1 657 aaKnown RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 HSD11B1LQ7Z5J1 315 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 CEACAM19Q7Z692 300 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TSEN54Q7Z6J9 526 aaKnown RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TMEM110Q86TL2 294 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 ARL14Q8N4G2 192 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR4Q3Q8NH05 313 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR52J3Q8NH60 311 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 NAF1Q96HR8 494 aaKnown RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 DHTKD1Q96HY7 919 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 ALG12Q9BV10 488 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TRIM15Q9C019 465 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TMEM117Q9H0C3 514 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 ADNPQ9H2P0 1102 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 POLD4Q9HCU8 107 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 CLEC5AQ9NY25 188 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF581Q9P0T4 197 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 RCOR3Q9P2K3 495 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 ANAPC7Q9UJX3 599 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 GMPPBQ9Y5P6 360 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 PIK3C2BO00750 1634 aa2.46□□□□□ -2.02
HMGB1P27-201ENST00000431429 TNS3Q68CZ2 1445 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF840PA6NDX5 716 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ACOD1A6NK06 481 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 BTN3A3O00478 584 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC17A2O00624 439 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 CXCL11O14625 94 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 MAGEB3O15480 346 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 PPIHO43447 177 aaKnown RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR1F1O43749 312 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 GPRIN2O60269 458 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 KBTBD11O94819 623 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 CSF2P04141 144 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 CAPN1P07384 714 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 GSTT2P0CG29 244 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 GSTT2BP0CG30 244 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 CT45A10P0DMU9 189 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 PDHBP11177 359 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ANXA3P12429 323 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 H2AFXP16104 143 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ELK3P41970 407 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ALDH3B2P48448 385 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 IFNAR2P48551 515 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 EMDP50402 254 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ARHGDIAP52565 204 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 GBX2P52951 348 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 UBE2HP62256 183 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 SPIBQ01892 262 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 MAP2K1Q02750 393 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 FCHO2Q0JRZ9 810 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ATXN7L3Q14CW9 347 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 TGIF1Q15583 401 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 TATDN3Q17R31 274 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 TMEM44Q2T9K0 475 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 OTUD3Q5T2D3 398 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 LGSNQ5TDP6 509 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 CYS1Q717R9 158 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 BHLHA9Q7RTU4 235 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR6T1Q8NGN1 323 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 RLN3Q8WXF3 142 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 AKR1E2Q96JD6 320 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 RANBP9Q96S59 729 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 RHOJQ9H4E5 214 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 RNF41Q9H4P4 317 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 DHX33Q9H6R0 707 aaKnown RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 ELL3Q9HB65 397 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 PALMDQ9NP74 551 aa2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 AATFQ9NY61 560 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 UTP6Q9NYH9 597 aaKnown RBP2.45□□□□□ -2.02
HMGB1P27-201ENST00000431429 MRPL39Q9NYK5 338 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms