RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 CKAP5Q14008 2032 aa10.53□□□□□ -0.72
USP4-205ENST00000431357 A0A1W2PS29 197 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 SHISA3A0PJX4 238 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 TRAPPC13A5PLN9 417 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 A6NL46 340 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 SOCS6O14544 535 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 PIP5K1CO60331 668 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 NCR1O76036 304 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 ZIC2O95409 532 aaPredicted RBP10.52□□□□□ -0.72
USP4-205ENST00000431357 PAK4O96013 591 aaPredicted RBP10.52□□□□□ -0.72
USP4-205ENST00000431357 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.72
USP4-205ENST00000431357 BMP7P18075 431 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 TALDO1P37837 337 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 BTG1P62324 171 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 RPS21P63220 83 aaKnown RBP10.52□□□□□ -0.72
USP4-205ENST00000431357 SGCGQ13326 291 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 TNK1Q13470 666 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 HACD4Q5VWC8 232 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 VASNQ6EMK4 673 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 LRRC28Q86X40 367 aaPredicted RBP10.52□□□□□ -0.72
USP4-205ENST00000431357 BBS1Q8NFJ9 593 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 NLGN4YQ8NFZ3 816 aaPredicted RBP10.52□□□□□ -0.72
USP4-205ENST00000431357 OR51G2Q8NGK0 314 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 OR5M3Q8NGP4 307 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 NT5CQ8TCD5 201 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 CDS1Q92903 461 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 MARVELD3Q96A59 401 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 CREB3L1Q96BA8 519 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 FCRL4Q96PJ5 515 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 ALG8Q9BVK2 526 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 FOLH1BQ9HBA9 442 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 TRIM36Q9NQ86 728 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 PLSCR3Q9NRY6 295 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 OR6C2Q9NZP2 312 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 NLKQ9UBE8 527 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 MALT1Q9UDY8 824 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 SLC7A7Q9UM01 511 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 GPSM3Q9Y4H4 160 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 STON1Q9Y6Q2 735 aa10.52□□□□□ -0.72
USP4-205ENST00000431357 MYO10Q9HD67 2058 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 C2orf92A0A1B0GVN3 265 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 OR52A4PA6NMU1 304 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 C12orf71A8MTZ7 269 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 ISM1B1AKI9 464 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 BET1O15155 118 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 B3GALNT1O75752 331 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 RCBTB2O95199 551 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 SLC2A10O95528 541 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 NDUFS1P28331 727 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 VEGFBP49765 207 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 ATP12AP54707 1039 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 TAS2R43P59537 309 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 RRAS2P62070 204 aaPredicted RBP10.52□□□□□ -0.73
USP4-205ENST00000431357 EEF1A1P68104 462 aaKnown RBP10.52□□□□□ -0.73
USP4-205ENST00000431357 TNFRSF17Q02223 184 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 CAMK1Q14012 370 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 LTB4RQ15722 352 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 ZNF57Q68EA5 555 aaPredicted RBP10.52□□□□□ -0.73
USP4-205ENST00000431357 NIPAL3Q6P499 406 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 NUDT18Q6ZVK8 323 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 ASPGQ86U10 573 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 TPRA1Q86W33 373 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 PAQR7Q86WK9 346 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 GPALPP1Q8IXQ4 340 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 OR2L13Q8N349 312 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 SIRT6Q8N6T7 355 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 SLC16A11Q8NCK7 471 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 OR7G2Q8NG99 324 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 OR4K14Q8NGD5 310 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 AHCYL2Q96HN2 611 aaKnown RBP10.52□□□□□ -0.73
USP4-205ENST00000431357 HS6ST2Q96MM7 605 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 CD180Q99467 661 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 GTPBP2Q9BX10 602 aaKnown RBP10.52□□□□□ -0.73
USP4-205ENST00000431357 C1QTNF7Q9BXJ2 289 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 OR52D1Q9H346 318 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 EVA1AQ9H8M9 152 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 CYSLTR2Q9NS75 346 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 SPHK1Q9NYA1 384 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 EXTL2Q9UBQ6 330 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 ZFR2Q9UPR6 939 aaKnown RBP10.52□□□□□ -0.73
USP4-205ENST00000431357 TMEM5Q9Y2B1 443 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 NTNG1Q9Y2I2 539 aa10.52□□□□□ -0.73
USP4-205ENST00000431357 ARPC4-TTLL3A0A0A6YYG9 625 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 FAM86C2PA6NEL3 165 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 SLC22A31A6NKX4 558 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 INMT-MINDY4F8WBC2 141 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 CDC42EP2O14613 210 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 SHOXO15266 292 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 LATO43561 262 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 FMO6PO60774 539 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 KAT7O95251 611 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 NTN1O95631 604 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 DBIP07108 87 aaKnown RBP10.51□□□□□ -0.73
USP4-205ENST00000431357 ELK1P19419 428 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 RBMS1P29558 406 aaKnown RBP10.51□□□□□ -0.73
USP4-205ENST00000431357 RFX3P48380 749 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 ZNF136P52737 540 aa10.51□□□□□ -0.73
USP4-205ENST00000431357 MAB21L1Q13394 359 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms