RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 RAB39AQ14964 217 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 CASP12Q6UXS9 341 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 SHISA6Q6ZSJ9 500 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 MBOAT2Q6ZWT7 520 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 GRAMD2AQ8IUY3 354 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 SLC38A9Q8NBW4 561 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 PLPP5Q8NEB5 264 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 TMEM255BQ8WV15 326 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.3
CALD1-207ENST00000430085 FAM46AQ96IP4 442 aaKnown RBP13.21□□□□□ -0.3
CALD1-207ENST00000430085 GAL3ST4Q96RP7 486 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 TSC22D3Q99576 134 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 TMEM27Q9HBJ8 222 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 SLC22A11Q9NSA0 550 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 ERVK-18Q9QC07 812 aa13.21□□□□□ -0.3
CALD1-207ENST00000430085 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.3
CALD1-207ENST00000430085 MRTO4Q9UKD2 239 aaKnown RBP13.21□□□□□ -0.3
CALD1-207ENST00000430085 ZFHX2Q9C0A1 2572 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 OTOGLQ3ZCN5 2332 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 NTN3O00634 580 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 RGS10O43665 173 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 LDOC1O95751 146 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 THY1P04216 161 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 IGFBP1P08833 259 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 ZGLP1P0C6A0 271 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 TSPAN31Q12999 210 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 FGFBP1Q14512 234 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 SLX4IPQ5VYV7 408 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 AHSA2Q719I0 299 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 BPHLQ86WA6 291 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 CCDC103Q8IW40 242 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 NRMQ8IXM6 262 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 CMIPQ8IY22 773 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 EFHD2Q96C19 240 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 NMD3Q96D46 503 aaKnown RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 LCORQ96JN0 433 aaPredicted RBP13.2□□□□□ -0.3
CALD1-207ENST00000430085 GPA33Q99795 319 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 PARD6AQ9NPB6 346 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 CLN6Q9NWW5 311 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 OCIAD1Q9NX40 245 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 CNIH4Q9P003 139 aa13.2□□□□□ -0.3
CALD1-207ENST00000430085 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 FRG2CA6NGY1 282 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 EFCAB7A8K855 629 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 M0R129 80 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 NTN1O95631 604 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 HEXBP07686 556 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 ZNF883P0CG24 379 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 HPGDP15428 266 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 GABRB1P18505 474 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 GSTT1P30711 240 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 OMPP47874 163 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 DCAF7P61962 342 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■■ 43.4
CALD1-207ENST00000430085 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 FAAH2Q6GMR7 532 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 XAF1Q6GPH4 301 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 ZNF613Q6PF04 617 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 ZNF550Q7Z398 422 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 CLVS1Q8IUQ0 354 aaPredicted RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 ZNF527Q8NB42 609 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 TEX47Q8TBZ9 253 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 MYCBPQ99417 103 aaPredicted RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 NUDT9Q9BW91 350 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 HOXD1Q9GZZ0 328 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 NXF5Q9H1B4 397 aaKnown RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 DNAJB12Q9NXW2 375 aaKnown RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 PRKNO60260 465 aaPredicted RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 TP53P04637 393 aaPredicted RBP13.19□□□□□ -0.3
CALD1-207ENST00000430085 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 PLAURQ03405 335 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 IL11RAQ14626 422 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 C12orf73Q69YU5 71 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 SLC29A4Q7RTT9 530 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 SVOPQ8N4V2 548 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 AGBL5Q8NDL9 886 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 OR1N1Q8NGS0 311 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 OR4C3Q8NH37 302 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 MYDGFQ969H8 173 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 SLC35B4Q969S0 331 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 RHNO1Q9BSD3 238 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 APMAPQ9HDC9 416 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 PCDHGB2Q9Y5G2 931 aa13.19□□□□□ -0.3
CALD1-207ENST00000430085 ZNF292O60281 2723 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 SH3D21A4FU49 640 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 SERINC4A6NH21 518 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 IL33O95760 270 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 CSTAP01040 98 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 GP1BAP07359 652 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 TGM1P22735 817 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms