RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 IGFLR1Q9H665 355 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 MED20Q9H944 212 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 PRDM7Q9NQW5 492 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 NUDT15Q9NV35 164 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 ZNF222Q9UK12 451 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 SLC7A7Q9UM01 511 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 RASD1Q9Y272 281 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 NOTCH4Q99466 2003 aa14□□□□□ -0.17
LINC00839-202ENST00000429940 EDDM13A0A1B0GTR0 161 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ZSCAN5BA6NJL1 495 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 LEUTXA8MZ59 168 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 SLC9A3R1O14745 358 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ZIC2O95409 532 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 NFATC1O95644 943 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 HOXB3P14651 431 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 F8A1P23610 371 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ATP5A1P25705 553 aaKnown RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 STOMP27105 288 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 BTCP35070 178 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 NUDT1P36639 197 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 PDX1P52945 283 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ELAVL3Q14576 367 aaKnown RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ZIC1Q15915 447 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 NTRK2Q16620 822 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 SMUG1Q53HV7 270 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ZBTB37Q5TC79 503 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 SLC48A1Q6P1K1 146 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 NIPAL3Q6P499 406 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ABHD17CQ6PCB6 329 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 TIGD4Q8IY51 512 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 OR2A1Q8NGT9 310 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 OR5W2Q8NH69 310 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ZNF431Q8TF32 576 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ING5Q8WYH8 240 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ELP4Q96EB1 424 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ATP13A2Q9NQ11 1180 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 TRIM36Q9NQ86 728 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 MRPL39Q9NYK5 338 aaKnown RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 COL6A3P12111 3177 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 DAPL1A0PJW8 107 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 GSAPA4D1B5 854 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 OR5F1O95221 314 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 F3P13726 295 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 POU3F3P20264 500 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 NPR2P20594 1047 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 CERS1P27544 350 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 SRP9P49458 86 aaKnown RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 OR10A3P58181 314 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 CDK3Q00526 305 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 FAM27D1Q5T7N8 215 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 MRM1Q6IN84 353 aaKnown RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 SFXN4Q6P4A7 337 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 ARL9Q6T311 187 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 MEPCEQ7L2J0 689 aaKnown RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 LSRQ86X29 649 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 OR11H7Q8NGC8 314 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 GANCQ8TET4 914 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 KAT2AQ92830 837 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 C12orf66Q96MD2 445 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 GPR137Q96N19 417 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 TIMP4Q99727 224 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 KRCC1Q9NPI7 259 aaPredicted RBP13.99□□□□□ -0.17
LINC00839-202ENST00000429940 CES1P1Q9UKY3 287 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 MGAT4AQ9UM21 535 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 HEATR5BQ9P2D3 2071 aa13.99□□□□□ -0.17
LINC00839-202ENST00000429940 C7orf66A4D0T2 115 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 TPD52L2O43399 206 aaKnown RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 PER3P56645 1201 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 LTB4RQ15722 352 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 SCMH1Q96GD3 660 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ABHD1Q96SE0 405 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ACTRT3Q9BYD9 372 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 DPAGT1Q9H3H5 408 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 GHITMQ9H3K2 345 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 RANBP3Q9H6Z4 567 aaPredicted RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 EMC7Q9NPA0 242 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ZNF443Q9Y2A4 671 aaPredicted RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 VCANP13611 3396 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 PRR23AA6NEV1 266 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ZGLP1P0C6A0 271 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 TBXA2RP21731 343 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ARFIP1P53367 373 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 STXBP1P61764 594 aaKnown RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 SHC2P98077 582 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 MLF2Q15773 248 aaPredicted RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ZNF655Q8N720 491 aaPredicted RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 OR2L5Q8NG80 312 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 OR10H4Q8NGA5 316 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 TRMT10AQ8TBZ6 339 aaKnown RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 FANK1Q8TC84 345 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ADAMTS15Q8TE58 950 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 SLC35A4Q96G79 324 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 LRRC3BQ96PB8 259 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 INSM2Q96T92 566 aaPredicted RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 OR52D1Q9H346 318 aa13.98□□□□□ -0.17
LINC00839-202ENST00000429940 MRPS30Q9NP92 439 aaKnown RBP13.98□□□□□ -0.17
LINC00839-202ENST00000429940 ZFP64Q9NPA5 681 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms