RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 KRCC1Q9NPI7 259 aaPredicted RBP7.54□□□□□ -1.2
HPS4-205ENST00000429411 ATP13A2Q9NQ11 1180 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 TAS2R7Q9NYW3 318 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 CA14Q9ULX7 337 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 A4GNTQ9UNA3 340 aa7.54□□□□□ -1.2
HPS4-205ENST00000429411 TRAV27A0A087WT01 109 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 A0A1B0GVT2 93 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 A0A1W2PQ72 361 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 A0A1W2PQU0 124 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 J3KRW8 73 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 MEN1O00255 615 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 GABRPO00591 440 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 RNGTTO60942 597 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 SEMA7AO75326 666 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR2B3O76000 313 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 UBXN7O94888 489 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 RPP14O95059 124 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 CD3GP09693 182 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 PVRP15151 417 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 GABRB1P18505 474 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 PDGFRLQ15198 375 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ZNF77Q15935 545 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 XKRXQ6PP77 449 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ZNF793Q6ZN11 406 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 ZNF438Q7Z4V0 828 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 COMTD1Q86VU5 262 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR8H3Q8N146 312 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 GATSQ8NAP1 163 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SIMC1Q8NDZ2 872 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR2T33Q8NG76 320 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR6F1Q8NGZ6 308 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR4C6Q8NH72 309 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 LILRB4Q8NHJ6 448 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 WFIKKN2Q8TEU8 576 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 HMGB4Q8WW32 186 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 TRIM63Q969Q1 353 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 TSACCQ96A04 125 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 SLC41A3Q96GZ6 507 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 CD180Q99467 661 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 TGIF2Q9GZN2 237 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SRRQ9GZT4 340 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 BTBD1Q9H0C5 482 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR52A5Q9H2C5 316 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 RPS6KB2Q9UBS0 482 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 REV1Q9UBZ9 1251 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ALG5Q9Y673 324 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SCN8AQ9UQD0 1980 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 DVL2O14641 736 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 AKR7A2O43488 359 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 PROM1O43490 865 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ZNF888P0CJ79 500 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 SHC1P29353 583 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 KIR2DL3P43628 341 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 PDX1P52945 283 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 NUBP1P53384 320 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 RAC1P63000 192 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 PRDX1Q06830 199 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 STX4Q12846 297 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ZNF155Q12901 538 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 UBXN2BQ14CS0 331 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ZNF79Q15937 498 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 NDUFA9Q16795 377 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 GXYLT1Q4G148 440 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 LIN54Q6MZP7 749 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 CAMKMTQ7Z624 323 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 TMEM163Q8TC26 289 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 FANK1Q8TC84 345 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SNX33Q8WV41 574 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SNAPC3Q92966 411 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SLC25A46Q96AG3 418 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 CHFRQ96EP1 664 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 CNRIP1Q96F85 164 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 COQ10AQ96MF6 247 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 RPP25Q9BUL9 199 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 ISG20L2Q9H9L3 353 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 BRD7Q9NPI1 651 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 C12orf4Q9NQ89 552 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 GRIP1Q9Y3R0 1128 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 FAM172BPA6NC97 362 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 POLR1CO15160 346 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 EMC8O43402 210 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 NARSO43776 548 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 KAT7O95251 611 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ACP2P11117 423 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ACADMP11310 421 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 TYRP1P17643 537 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SRP9P49458 86 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 PGDP52209 483 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 HCCSP53701 268 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 PDE7AQ13946 482 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 EXOSC7Q15024 291 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 DEFB110Q30KQ9 67 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 FAM111BQ6SJ93 734 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 ESPNLQ6ZVH7 1005 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 AMIGO1Q86WK6 493 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms