RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 TP53BP1Q12888 1972 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 IMPA2O14732 288 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 MID1O15344 667 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 SPINT1O43278 529 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 DHFRP00374 187 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 AK4P27144 223 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 ZNF33BQ06732 778 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 ZNF155Q12901 538 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 ZNF234Q14588 700 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 HES5Q5TA89 166 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 LINGO2Q7L985 606 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 GDF7Q7Z4P5 450 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 OR11H4Q8NGC9 324 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 RFKQ969G6 155 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 WDFY2Q96P53 400 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 PDCD1LG2Q9BQ51 273 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 SLC38A1Q9H2H9 487 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 OR52D1Q9H346 318 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 ZNF346Q9UL40 294 aaKnown RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 TEAD1P28347 426 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 CTNNB1P35222 781 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 POU6F2P78424 691 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 PRR5P85299 388 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 TRMT12Q53H54 448 aaKnown RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 ZNF322Q6U7Q0 402 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 IKBIPQ70UQ0 350 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 ZNF761Q86XN6 746 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 OR6K6Q8NGW6 343 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 OR4K13Q8NH42 304 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 OR5W2Q8NH69 310 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 SUN3Q8TAQ9 357 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 SLC35A4Q96G79 324 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 METTL2AQ96IZ6 378 aaKnown RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 UBQLN3Q9H347 655 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 RTTNQ86VV8 2226 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 RNF13O43567 381 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 PPP1R3DO95685 299 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 NDUFV2P19404 249 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 MPIP34949 423 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 AP2S1P53680 142 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 EXOSC7Q15024 291 aaKnown RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 LCTLQ6UWM7 567 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 KANSL1Q7Z3B3 1105 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 OR52L1Q8NGH7 329 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 PMEPA1Q969W9 287 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 OTUB2Q96DC9 234 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 CAPNS2Q96L46 248 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 COQ10AQ96MF6 247 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 BTBD1Q9H0C5 482 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 CLEC4MQ9H2X3 399 aaPredicted RBP11.64□□□□□ -0.55
CDH3-202ENST00000429102 AUNIPQ9H7T9 357 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 SERGEFQ9UGK8 458 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 TMEM5Q9Y2B1 443 aa11.64□□□□□ -0.55
CDH3-202ENST00000429102 IGKV1-8A0A0C4DH67 115 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 TSPAN9O75954 239 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 HIST1H1TP22492 207 aaPredicted RBP11.63□□□□□ -0.55
CDH3-202ENST00000429102 TSPAN31Q12999 210 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 THSD4Q6ZMP0 1018 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 SIAH3Q8IW03 269 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 FAM109AQ8N4B1 249 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 FANK1Q8TC84 345 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 ADAM30Q9UKF2 790 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 IDSB3KWA1 339 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 LAMP2P13473 410 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 GSTM3P21266 225 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 NT5EP21589 574 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 ACSL1P33121 698 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 P2RY2P41231 377 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 SOX2P48431 317 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 ATP12AP54707 1039 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 RAB14P61106 215 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 CDK3Q00526 305 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 BNC1Q01954 994 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 FAM98AQ8NCA5 519 aaKnown RBP11.63□□□□□ -0.55
CDH3-202ENST00000429102 SDR9C7Q8NEX9 313 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 OR2T35Q8NGX2 323 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 OR5K2Q8NHB8 316 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 SETD7Q8WTS6 366 aaKnown RBP11.63□□□□□ -0.55
CDH3-202ENST00000429102 CBLCQ9ULV8 474 aa11.63□□□□□ -0.55
CDH3-202ENST00000429102 ANAPC1Q9H1A4 1944 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 ABHD14A-ACY1A0A1B0GW23 586 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 MEIS3P1A6NDR6 274 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 SURF4O15260 269 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 RAD1O60671 282 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 RASGRP1O95267 797 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 THY1P04216 161 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 SF3A2Q15428 464 aaKnown RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 MAPK14Q16539 360 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 C2orf27AQ580R0 203 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 POMZP3Q6PJE2 187 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 ERN2Q76MJ5 926 aaKnown RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 RNF44Q7L0R7 432 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 ZNF527Q8NB42 609 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 OR11H7Q8NGC8 314 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms