RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 HS6ST2Q96MM7 605 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 COQ7Q99807 217 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 PRSS27Q9BQR3 290 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 TMEM27Q9HBJ8 222 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 MRPS33Q9Y291 106 aaKnown RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 PRUNE2Q8WUY3 3088 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 A0A1W2PPC4 97 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 B4DGG1 531 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 PEX12O00623 359 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 CTDSP2O14595 271 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 CDC42EP2O14613 210 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 CDRT1O95170 752 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 RCBTB2O95199 551 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 APOL3O95236 402 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 DLGAP3O95886 979 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 IGHA1P01876 353 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 LIMS3P0CW19 117 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 LIMS4P0CW20 117 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 ST6GAL1P15907 406 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 GTF2E2P29084 291 aaKnown RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 TNFSF8P32971 234 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 ATP6V1E1P36543 226 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 SLC13A2Q13183 592 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 ZSWIM7Q19AV6 140 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 HSDL2Q6YN16 418 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 TMPRSS11AQ6ZMR5 421 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 CADM3Q8N126 398 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 FAM83FQ8NEG4 500 aaPredicted RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 OR52R1Q8NGF1 315 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 OR52N1Q8NH53 320 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 GATAD2BQ8WXI9 593 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 LMF2Q9BU23 707 aaKnown RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 GPR174Q9BXC1 333 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 BARHL1Q9BZE3 327 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 OR52D1Q9H346 318 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 UBQLN3Q9H347 655 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 SIDT1Q9NXL6 827 aaKnown RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 WSB2Q9NYS7 404 aaPredicted RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 MED31Q9Y3C7 131 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 CMAHPQ9Y471 501 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 ARHGEF17Q96PE2 2063 aaPredicted RBP12.7□□□□□ -0.38
THBS3-202ENST00000428962 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
THBS3-202ENST00000428962 CBX7O95931 251 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 CT62P0C5K7 136 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 IFI30P13284 250 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 RNH1P13489 461 aaKnown RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 PRG2P13727 222 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 TYRP1P17643 537 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 PAICSP22234 425 aaKnown RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 SLC9A3P48764 834 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 PPP1CAP62136 330 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 PSPHP78330 225 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 ACSM1Q08AH1 577 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 AMZ1Q400G9 498 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 FLYWCH1Q4VC44 716 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 BMP8AQ7Z5Y6 402 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 ZNF761Q86XN6 746 aaPredicted RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 OR9A4Q8NGU2 314 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 TM9SF4Q92544 642 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 TMCO6Q96DC7 493 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 C1GALT1C1Q96EU7 318 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 STARD5Q9NSY2 213 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 QPCTLQ9NXS2 382 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 TNFRSF10DQ9UBN6 386 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 CBLCQ9ULV8 474 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 GXYLT2A0PJZ3 443 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 SLC35F4A4IF30 521 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 FAM86C2PA6NEL3 165 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 SRPX2O60687 465 aaPredicted RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 KCNK2O95069 426 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 LYPD3O95274 346 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 GKN3PP0CG01 181 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 DRD5P21918 477 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 C1orf61Q13536 156 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 DEFB110Q30KQ9 67 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 CRTC2Q53ET0 693 aaPredicted RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 GARNL3Q5VVW2 1013 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 TMPRSS11FQ6ZWK6 438 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 SHFQ7M4L6 423 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 GRAMD2AQ8IUY3 354 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 MCATQ8IVS2 390 aaKnown RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 SFTPA2Q8IWL1 248 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 SLC43A2Q8N370 569 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 SETD6Q8TBK2 473 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 DOK4Q8TEW6 326 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 HTRA1Q92743 480 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 LRRC61Q9BV99 259 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 UBE2ZQ9H832 354 aaPredicted RBP12.69□□□□□ -0.38
THBS3-202ENST00000428962 TOR4AQ9NXH8 423 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 KCNE5Q9UJ90 142 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 SF3B6Q9Y3B4 125 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms