RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 C18orf12Q96KH6 178 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 C3orf30Q96M34 536 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 RNF145Q96MT1 663 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 TRMOQ9BU70 441 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 KLHL4Q9C0H6 718 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 PLSCR4Q9NRQ2 329 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 MKS1Q9NXB0 559 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 ATP6V1HQ9UI12 483 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 TRAF6Q9Y4K3 522 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 KCNE3Q9Y6H6 103 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 DNHD1Q96M86 4753 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 NPIPA5A0A0B4J1W7 369 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 C7orf72A4D263 438 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 NPIPA7E9PJI5 369 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 ADAMDEC1O15204 470 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 KLF4O43474 513 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 HMGN2P05204 90 aaKnown RBP13.89□□□□□ -0.19
SEC13-210ENST00000428626 INHBBP09529 407 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 NPIPA8P0DM63 369 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 LAMP1P11279 417 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 NID1P14543 1247 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 PRIM2P49643 509 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 LTBQ06643 244 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 XKR7Q5GH72 579 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 Q5PR19 223 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 PPP4R4Q6NUP7 873 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 TRABD2AQ86V40 505 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 OR6Y1Q8NGX8 325 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 AGR3Q8TD06 166 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 CDS1Q92903 461 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 APOPT1Q96IL0 206 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 SLC39A3Q9BRY0 314 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 UBTD1Q9HAC8 227 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 TMED5Q9Y3A6 229 aa13.89□□□□□ -0.19
SEC13-210ENST00000428626 JMJD1CQ15652 2540 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 A0A087WZY1 265 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 TLDC2A0PJX2 215 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 TNFSF11O14788 317 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 SCAMP2O15127 329 aaKnown RBP13.88□□□□□ -0.19
SEC13-210ENST00000428626 NPHS1O60500 1241 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 SS18L1O75177 396 aaPredicted RBP13.88□□□□□ -0.19
SEC13-210ENST00000428626 SPAG7O75391 227 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 ALOX5P09917 674 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 LINGO3P0C6S8 592 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 CREB1P16220 341 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 RAC1P63000 192 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 ZNF117Q03924 483 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 LASP1Q14847 261 aaKnown RBP13.88□□□□□ -0.19
SEC13-210ENST00000428626 PTGR1Q14914 329 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 ACKR1Q16570 336 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEC13-210ENST00000428626 CPTPQ5TA50 214 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 SHEQ5VZ18 495 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 CBLN3Q6UW01 205 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 STAC2Q6ZMT1 411 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 BIVMQ86UB2 503 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 WDR75Q8IWA0 830 aaKnown RBP13.88□□□□□ -0.19
SEC13-210ENST00000428626 COX18Q8N8Q8 333 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 OR2V1Q8NHB1 315 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 ACTRT2Q8TDY3 377 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 IGFBPL1Q8WX77 278 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 JADE3Q92613 823 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 MTERF3Q96E29 417 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 GMPPAQ96IJ6 420 aaPredicted RBP13.88□□□□□ -0.19
SEC13-210ENST00000428626 PIP5K1AQ99755 562 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 C1orf50Q9BV19 199 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 CXorf36Q9H7Y0 433 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 ANKZF1Q9H8Y5 726 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 UBQLN4Q9NRR5 601 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 ZCCHC3Q9NUD5 404 aaKnown RBP13.88□□□□□ -0.19
SEC13-210ENST00000428626 GIN1Q9NXP7 522 aa13.88□□□□□ -0.19
SEC13-210ENST00000428626 A0A1W2PQD3 144 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 PEX11AO75192 247 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 PLAUP00749 431 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 FCGR2AP12318 317 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 ASMTP46597 345 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 POU6F2P78424 691 aaPredicted RBP13.87□□□□□ -0.19
SEC13-210ENST00000428626 FOXF1Q12946 379 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 FGFBP1Q14512 234 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 MLC1Q15049 377 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 TOMM34Q15785 309 aaPredicted RBP13.87□□□□□ -0.19
SEC13-210ENST00000428626 NDUFAF6Q330K2 333 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 ZCCHC12Q6PEW1 402 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 KRTCAP2Q8N6L1 136 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 OR6K3Q8NGY3 331 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 B4GALNT2Q8NHY0 566 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 ZBTB8AQ96BR9 441 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 BTBD2Q9BX70 525 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 SRXN1Q9BYN0 137 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 PRRG4Q9BZD6 226 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 L2HGDHQ9H9P8 463 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 DUSP22Q9NRW4 184 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 GPATCH2Q9NW75 528 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 ZDHHC2Q9UIJ5 367 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
SEC13-210ENST00000428626 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms