RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 LBPP18428 481 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 CLDN15P56746 228 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 SORDQ00796 357 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 CLECL1Q8IZS7 167 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 B4GALNT2Q8NHY0 566 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 LINC01560Q8TB33 94 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 PHOSPHO1Q8TCT1 267 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 FIG4Q92562 907 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 OR7D2Q96RA2 312 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 HOXD1Q9GZZ0 328 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 HAO1Q9UJM8 370 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 KCNE3Q9Y6H6 103 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 NPIPA5A0A0B4J1W7 369 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 TMEM120BA0PK00 339 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 A6NNC1 897 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 NPIPA7E9PJI5 369 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 H3BNH8 94 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 EIF1AYO14602 144 aaKnown RBP16.6■□□□□ 0.25
GPC1-205ENST00000427506 CRHP06850 196 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 NPIPA8P0DM63 369 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 ZNF17P17021 662 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 CPOXP36551 454 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 SIRPAP78324 504 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 PON3Q15166 354 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 CD226Q15762 336 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 C6orf120Q7Z4R8 191 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 WDR75Q8IWA0 830 aaKnown RBP16.6■□□□□ 0.25
GPC1-205ENST00000427506 ZNF614Q8N883 585 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 VPS37AQ8NEZ2 397 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 OR5D16Q8NGK9 328 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 OR4A15Q8NGL6 344 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 ACTRT2Q8TDY3 377 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 ZBTB8AQ96BR9 441 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 ZNF845Q96IR2 970 aaPredicted RBP16.6■□□□□ 0.25
GPC1-205ENST00000427506 PRRG4Q9BZD6 226 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 CLEC4MQ9H2X3 399 aaPredicted RBP16.6■□□□□ 0.25
GPC1-205ENST00000427506 MED17Q9NVC6 651 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 GALNT8Q9NY28 637 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 ZNF175Q9Y473 711 aa16.6■□□□□ 0.25
GPC1-205ENST00000427506 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 RNF103-CHMP3A0A140T963 221 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 GTPBP1O00178 669 aaKnown RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 RNASET2O00584 256 aaKnown RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 TNFSF13O75888 250 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 CPSF4O95639 269 aaKnown RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 NUDT14O95848 222 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 EPXP11678 715 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 MATN1P21941 496 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 EIF1AXP47813 144 aaKnown RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 RNF144AP50876 292 aaPredicted RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 RPS26P62854 115 aaKnown RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 TMEM44Q2T9K0 475 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 ANXA8L1Q5VT79 327 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 CLEC4FQ8N1N0 589 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 GTPBP8Q8N3Z3 284 aaPredicted RBP16.59■□□□□ 0.25
GPC1-205ENST00000427506 METTL25Q8N6Q8 603 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 OR8J2Q8NGG1 315 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 FNDC9Q8TBE3 224 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 NRGNQ92686 78 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 SLC35G5Q96KT7 338 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 RNF145Q96MT1 663 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 MEAF6Q9HAF1 191 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 RASSF1Q9NS23 344 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 NKIRAS1Q9NYS0 192 aa16.59■□□□□ 0.25
GPC1-205ENST00000427506 DOCK7Q96N67 2140 aa16.58■□□□□ 0.25
GPC1-205ENST00000427506 UQCRHLA0A096LP55 91 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 DUXAA6NLW8 204 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 A8MXE2 369 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 OPN1LWP04000 364 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 ME2P23368 584 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 ATP12AP54707 1039 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 WDR4P57081 412 aaKnown RBP16.58■□□□□ 0.24
GPC1-205ENST00000427506 MAGOHP61326 146 aaKnown RBP16.58■□□□□ 0.24
GPC1-205ENST00000427506 ZNF117Q03924 483 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 PLPPR5Q32ZL2 321 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 KLHL26Q53HC5 615 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 VWA1Q6PCB0 445 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 GGNQ86UU5 652 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 ANKRD46Q86W74 232 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 LRRC34Q8IZ02 419 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 NPAS1Q99742 590 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 THAP1Q9NVV9 213 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 CARD8Q9Y2G2 431 aa16.58■□□□□ 0.24
GPC1-205ENST00000427506 PRSS51A0A1B0GVH4 220 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 MSTNO14793 375 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 KITP10721 976 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 FCGR2AP12318 317 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 CLNS1AP54105 237 aaKnown RBP16.57■□□□□ 0.24
GPC1-205ENST00000427506 NME5P56597 212 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 RAC1P63000 192 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 OCRLQ01968 901 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 DAZAP2Q15038 168 aaPredicted RBP16.57■□□□□ 0.24
GPC1-205ENST00000427506 ATG16L1Q676U5 607 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 TESCQ96BS2 214 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 STARD4Q96DR4 205 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 SDF2Q99470 211 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 TMEM185BQ9H7F4 350 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 RNF122Q9H9V4 155 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 EXD2Q9NVH0 621 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms