RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 OR10Q1Q8NGQ4 319 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 RBCK1Q9BYM8 510 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 LHPPQ9H008 270 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 RBM39Q14498 530 aaKnown RBP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 C4orf17Q53FE4 359 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 PRAMEF8Q5VWM4 474 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 PRAMEF7Q5VXH5 474 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 SYNPRQ8TBG9 265 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 SLCO5A1Q9H2Y9 848 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 IL21RQ9HBE5 538 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 RARRES3Q9UL19 164 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 SOD2P04179 222 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 DIO3P55073 304 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF74Q16587 644 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 OR4K5Q8NGD3 323 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 ADAMTS6Q9UKP5 1117 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 MCTS1Q9ULC4 181 aaKnown RBP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 OR6C65A6NJZ3 312 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 INHAP05111 366 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 HABP2Q14520 560 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 ABHD11Q8NFV4 315 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 TXNL4BQ9NX01 149 aaKnown RBP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 TMEM98Q9Y2Y6 226 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF337Q9Y3M9 751 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 ENTPD2Q9Y5L3 495 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 SGSHP51688 502 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 LAPTM4AQ15012 233 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 PPP1R3AQ16821 1122 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 STK17BO94768 372 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF28P17035 718 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 CTXN1P60606 82 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 PLA2G7Q13093 441 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 CATR1Q13166 79 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 SFRP4Q6FHJ7 346 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-203ENST00000427191 SLC43A2Q8N370 569 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 MIB2Q96AX9 1013 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 A0A1W2PPK0 400 aa13.65□□□□□ -0.23
PTPN13-203ENST00000427191 LEFTY2O00292 366 aa13.65□□□□□ -0.23
PTPN13-203ENST00000427191 AGTR2P50052 363 aa13.65□□□□□ -0.23
PTPN13-203ENST00000427191 SLC14A2Q15849 920 aa13.65□□□□□ -0.23
PTPN13-203ENST00000427191 CHRDQ9H2X0 955 aa13.65□□□□□ -0.23
PTPN13-203ENST00000427191 PLAGL1Q9UM63 463 aa13.65□□□□□ -0.23
PTPN13-203ENST00000427191 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 PLSCR5A0PG75 271 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 CLIC3O95833 236 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 CPOXP36551 454 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 SELENOWP63302 87 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 EMC10Q5UCC4 262 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 SLC15A4Q8N697 577 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 LPAR4Q99677 370 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF416Q9BWM5 594 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 ADAM19Q9H013 955 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 B4GALT6Q9UBX8 382 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 KDM4FA0A1W2PPD8 638 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 MSTNO14793 375 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 INPPL1O15357 1258 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 TBX18O95935 607 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 DEFB134Q4QY38 66 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 NDUFAF5Q5TEU4 345 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 PATZ1Q9HBE1 687 aaKnown RBP13.64□□□□□ -0.23
PTPN13-203ENST00000427191 HAO2Q9NYQ3 351 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 DNAJB11Q9UBS4 358 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 CBLP22681 906 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 MEF2AQ02078 507 aaPredicted RBP13.64□□□□□ -0.23
PTPN13-203ENST00000427191 NSDHLQ15738 373 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 HIST2H3AQ71DI3 136 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 SIMC1Q8NDZ2 872 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 SLC30A7Q8NEW0 376 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 A6NCN8 305 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 FABP1P07148 127 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 SLC10A1Q14973 349 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 PCK2Q16822 640 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 TMEM135Q86UB9 458 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 ZBTB8AQ96BR9 441 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 MED17Q9NVC6 651 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 LOC105369274A0A096LPK9 316 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 SGCEO43556 437 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 ADAM23O75077 832 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 HNF1BP35680 557 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 FXYD4P59646 89 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 MSS51Q4VC12 460 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 TMEM201Q5SNT2 666 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 OR4N4Q8N0Y3 316 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 PRRC1Q96M27 445 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF266Q14584 549 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 CMTM8Q8IZV2 173 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 C15orf54Q8N8G6 183 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 NKX3-1Q99801 234 aaPredicted RBP13.64□□□□□ -0.23
PTPN13-203ENST00000427191 NUDT9Q9BW91 350 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 PBX4Q9BYU1 374 aa13.64□□□□□ -0.23
PTPN13-203ENST00000427191 HHLA2Q9UM44 414 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms