RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RPS26P11Q5JNZ5 115 aaPredicted RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 SIRT6Q8N6T7 355 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 APCDD1LQ8NCL9 501 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 OR5D16Q8NGK9 328 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 OR14A16Q8NHC5 309 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 SLC2A12Q8TD20 617 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 BRIX1Q8TDN6 353 aaKnown RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 OR7D2Q96RA2 312 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 NUDT9Q9BW91 350 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 PINK1Q9BXM7 581 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 RIBC2Q9H4K1 309 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 ANKRA2Q9H9E1 313 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 CXorf21Q9HAI6 301 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 PAPOLBQ9NRJ5 636 aaKnown RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 ACER3Q9NUN7 267 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 NDRG4Q9ULP0 352 aaKnown RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 C19orf53Q9UNZ5 99 aaPredicted RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 ERVK-19Q9WJR5 959 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 GMPPBQ9Y5P6 360 aa14.42□□□□□ -0.1
SHOX2-202ENST00000425436 TNRC6AQ8NDV7 1962 aaKnown RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 NUP214P35658 2090 aaPredicted RBP14.42□□□□□ -0.1
SHOX2-202ENST00000425436 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PLOD3O60568 738 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PIGAP37287 484 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 LIMS1P48059 325 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 NUP107P57740 925 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 HPCAP84074 193 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MGAT2Q10469 447 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PRICKLE4Q2TBC4 344 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 FCRLBQ6BAA4 426 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 C16orf62Q7Z3J2 963 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ALDH16A1Q8IZ83 802 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 TAGAPQ8N103 731 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MORN4Q8NDC4 146 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 SIMC1Q8NDZ2 872 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF675Q8TD23 568 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ELP5Q8TE02 316 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF721Q8TF20 911 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 THAP3Q8WTV1 239 aaPredicted RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PSMF1Q92530 271 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 TTC9Q92623 222 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 KAT2AQ92830 837 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF566Q969W8 418 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 GIMAP5Q96F15 307 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 FEVQ99581 238 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 BARD1Q99728 777 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PELOQ9BRX2 385 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 LHPPQ9H008 270 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MMP25Q9NPA2 562 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 GPR83Q9NYM4 423 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF223Q9UK11 482 aaPredicted RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 SLC13A4Q9UKG4 626 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 IFT52Q9Y366 437 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 CACNA1GO43497 2377 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 TRBV11-1A0A0K0K1C0 115 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 SYNDIG1LA6NDD5 238 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PRAMEF25A6NGN4 478 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MRPS14O60783 128 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 LGI1O95970 557 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 AK1P00568 194 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 CRHBPP24387 322 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 SSTR4P31391 388 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 IFNA8P32881 189 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 SOX18P35713 384 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ST13P50502 369 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 IL1RL1Q01638 556 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 EXOC3L2Q2M3D2 409 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 TRMT12Q53H54 448 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF628Q5EBL2 1059 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 FOXB2Q5VYV0 432 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 B3GNTL1Q67FW5 361 aaPredicted RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 HEPHL1Q6MZM0 1159 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MFSD12Q6NUT3 480 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF773Q6PK81 442 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 GALNT5Q7Z7M9 940 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 GALNT12Q8IXK2 581 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PARP8Q8N3A8 854 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 GPR32P1Q8NGA4 272 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 OR1N1Q8NGS0 311 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 C16orf58Q96GQ5 468 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 DHRS1Q96LJ7 313 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ALPK1Q96QP1 1244 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PITX2Q99697 317 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 TUBA1CQ9BQE3 449 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ADNPQ9H2P0 1102 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MTHFD2LQ9H903 347 aaPredicted RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 LIN28AQ9H9Z2 209 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 KLHL28Q9NXS3 571 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 MAT2BQ9NZL9 334 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ACAD8Q9UKU7 415 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 PPIEQ9UNP9 301 aaKnown RBP14.41□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF232Q9UNY5 417 aa14.41□□□□□ -0.1
SHOX2-202ENST00000425436 KMT2BQ9UMN6 2715 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 PRAMEF27A3QJZ7 478 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 E9PQ18 207 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 K7EM74 188 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 FAAHO00519 579 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 DYRK3O43781 588 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 PRKNO60260 465 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 MITFO75030 526 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms