RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 NXNL2Q5VZ03 156 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ZNF425Q6IV72 752 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 B3GLCTQ6Y288 498 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 HSDL2Q6YN16 418 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 UBE2J2Q8N2K1 259 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 LRRC25Q8N386 305 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 BBS1Q8NFJ9 593 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 OR7G1Q8NGA0 311 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 OR4Q3Q8NH05 313 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ARSGQ96EG1 525 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SLC41A3Q96GZ6 507 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 TMED9Q9BVK6 235 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 TRIM45Q9H8W5 580 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 CALML5Q9NZT1 146 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ZNF624Q9P2J8 865 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 CLCA2Q9UQC9 943 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 CSNK1G3Q9Y6M4 447 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 GSAPA4D1B5 854 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 A8MV72 311 aaPredicted RBP9.93□□□□□ -0.82
CUX1-205ENST00000425244 B4DGG1 531 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 TMCC2O75069 709 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 IL7P13232 177 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 PRKACBP22694 351 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 CD27P26842 260 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 OMPP47874 163 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 GAS1P54826 345 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 EFNB1P98172 346 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 SLC25A30Q5SVS4 291 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 RNLSQ5VYX0 342 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 RASSF6Q6ZTQ3 369 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 GDF7Q7Z4P5 450 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 IL17RDQ8NFM7 739 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 GIMAP5Q96F15 307 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 SCARF2Q96GP6 870 aaPredicted RBP9.93□□□□□ -0.82
CUX1-205ENST00000425244 CTRCQ99895 268 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 PRRG3Q9BZD7 231 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 ADAP2Q9NPF8 381 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 LYARQ9NX58 379 aaKnown RBP9.93□□□□□ -0.82
CUX1-205ENST00000425244 SLC7A7Q9UM01 511 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 WDR45Q9Y484 360 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 CEP192Q8TEP8 1941 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 EML5Q05BV3 1969 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 CENPVL1A0A0U1RR11 272 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 FABP12A6NFH5 140 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 FAM183AA6NL82 134 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 CASKO14936 926 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 IL1AP01583 271 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 HOXC4P09017 264 aaPredicted RBP9.93□□□□□ -0.82
CUX1-205ENST00000425244 SLC35G6P0C7Q6 338 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 LIMS3P0CW19 117 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 LIMS4P0CW20 117 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 TCEA1P23193 301 aaKnown RBP9.93□□□□□ -0.82
CUX1-205ENST00000425244 FABP5Q01469 135 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 PRAMEF8Q5VWM4 474 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 PRAMEF7Q5VXH5 474 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 MFSD12Q6NUT3 480 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 FRRS1Q6ZNA5 592 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 PARGQ86W56 976 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 PAQR7Q86WK9 346 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 SHISA5Q8N114 240 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 CAPSLQ8WWF8 208 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 OSTF1Q92882 214 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 FGF11Q92914 225 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 GAL3ST3Q96A11 431 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 MS4A4EQ96PG1 132 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 TEX12Q9BXU0 123 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 HDHD5Q9BXW7 423 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 SRRQ9GZT4 340 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 KIR3DX1Q9H7L2 352 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 SIAEQ9HAT2 523 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 CAPN10Q9HC96 672 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 OR6C2Q9NZP2 312 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 COMMD3Q9UBI1 195 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 MALT1Q9UDY8 824 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 ZNF443Q9Y2A4 671 aaPredicted RBP9.93□□□□□ -0.82
CUX1-205ENST00000425244 HEBP2Q9Y5Z4 205 aa9.93□□□□□ -0.82
CUX1-205ENST00000425244 NPIPA5A0A0B4J1W7 369 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 IQCMA0A1B0GVH7 501 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 TMEM129A0AVI4 362 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 NPIPA7E9PJI5 369 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 TNFRSF10CO14798 259 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 P2RX6O15547 441 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 THY1P04216 161 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 KRT8P05787 483 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 NPIPA8P0DM63 369 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 PRKAR1BP31321 381 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 RFX3P48380 749 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 DHPSP49366 369 aaPredicted RBP9.92□□□□□ -0.82
CUX1-205ENST00000425244 COPZ1P61923 177 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 DUSP5Q16690 384 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 PLK5Q496M5 336 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 PYDC2Q56P42 97 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 PDZK1Q5T2W1 519 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 AGAP6Q5VW22 663 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 SMARCD3Q6STE5 483 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 GATAD2AQ86YP4 633 aa9.92□□□□□ -0.82
CUX1-205ENST00000425244 ACOT11Q8WXI4 607 aaPredicted RBP9.92□□□□□ -0.82
CUX1-205ENST00000425244 ART5Q96L15 291 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms