RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 DNAJA1P31689 397 aaKnown RBP9.49□□□□□ -0.89
MDC1-205ENST00000425072 HMGA2P52926 109 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 RGS8P57771 180 aaPredicted RBP9.49□□□□□ -0.89
MDC1-205ENST00000425072 COPZ1P61923 177 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 SNTA1Q13424 505 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 NTRK2Q16620 822 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 NRF1Q16656 503 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 GRAMD1BQ3KR37 738 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 ACER2Q5QJU3 275 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 ABHD17BQ5VST6 288 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 SLC22A10Q63ZE4 541 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 ZNF836Q6ZNA1 936 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 OLIG3Q7RTU3 272 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 AMIGO2Q86SJ2 522 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 HIPK1Q86Z02 1210 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 PRR22Q8IZ63 422 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 CLIP4Q8N3C7 705 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 SVOPLQ8N434 492 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 LINC00471Q8N535 108 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 PIK3C3Q8NEB9 887 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 TOR1AIP2Q8NFQ8 470 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 PHOSPHO1Q8TCT1 267 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 SDCCAG3Q96C92 435 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 SPACA9Q96E40 222 aaPredicted RBP9.49□□□□□ -0.89
MDC1-205ENST00000425072 LMF1Q96S06 567 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 RASL10BQ96S79 203 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 PIP5K1AQ99755 562 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 ZNF559Q9BR84 538 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 C9orf16Q9BUW7 83 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 FNDC11Q9BVV2 318 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 TRIM2Q9C040 744 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 LAT2Q9GZY6 243 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 VCXQ9H320 206 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 CCDC86Q9H6F5 360 aaKnown RBP9.49□□□□□ -0.89
MDC1-205ENST00000425072 CNIH4Q9P003 139 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 NDUFAF4Q9P032 175 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 NKX1-2Q9UD57 310 aaPredicted RBP9.49□□□□□ -0.89
MDC1-205ENST00000425072 KCNE5Q9UJ90 142 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 TMCC3Q9ULS5 477 aa9.49□□□□□ -0.89
MDC1-205ENST00000425072 DOCK10Q96BY6 2186 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ZZEF1O43149 2961 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 G3V2T6 193 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 hCG_2039718K7EN88 272 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 CASQ2O14958 399 aaPredicted RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 NKX2-8O15522 239 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 PEX1O43933 1283 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 FADS1O60427 444 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 E2F6O75461 281 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 DNAJB5O75953 348 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 PRSS23O95084 383 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 THRBP10828 461 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ITGA3P26006 1051 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 RRM2P31350 389 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 SLC6A8P48029 635 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 CYB561P49447 251 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 VLDLRP98155 873 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 Q0VFX4 171 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ST3GAL3Q11203 375 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 TRIP10Q15642 601 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ZNF791Q3KP31 576 aaPredicted RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 MRPL2Q5T653 305 aaKnown RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 BROXQ5VW32 411 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 SLC30A6Q6NXT4 461 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 TMEM81Q6P7N7 255 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 IL20RBQ6UXL0 311 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ZBTB49Q6ZSB9 765 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 RRM2BQ7LG56 351 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ZAR1Q86SH2 424 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 VASH2Q86V25 355 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 ZDHHC13Q8IUH4 622 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 LILRA2Q8N149 483 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 GALNT16Q8N428 558 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 OR6T1Q8NGN1 323 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 OR5K1Q8NHB7 308 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 VANGL1Q8TAA9 524 aaPredicted RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 SNIP1Q8TAD8 396 aaKnown RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 APOBEC4Q8WW27 367 aaKnown RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 PSMF1Q92530 271 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 EME1Q96AY2 570 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 MCHR1Q99705 422 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 KLHL4Q9C0H6 718 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 SEMA6AQ9H2E6 1030 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 EXOSC3Q9NQT5 275 aaKnown RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 RLIMQ9NVW2 624 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 HPF1Q9NWY4 346 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 SELENONQ9NZV5 590 aa9.48□□□□□ -0.89
MDC1-205ENST00000425072 CNOT11Q9UKZ1 510 aaKnown RBP9.48□□□□□ -0.89
MDC1-205ENST00000425072 NPIPA5A0A0B4J1W7 369 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 ANKRD33BA6NCL7 494 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 NPIPA7E9PJI5 369 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 TNFRSF11BO00300 401 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 ICOSLGO75144 302 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 CYP7B1O75881 506 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 SNX4O95219 450 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 OR5F1O95221 314 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 GADD45GO95257 159 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 ANGPTL1O95841 491 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 MT-ND1P03886 318 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 CAPNS1P04632 268 aa9.47□□□□□ -0.89
MDC1-205ENST00000425072 H1F0P07305 194 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms