RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 BAK1Q16611 211 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ODF4Q2M2E3 257 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 HYAL4Q2M3T9 481 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 C12orf73Q69YU5 71 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ABHD13Q7L211 337 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 TMEM99Q8N816 258 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 CAMKVQ8NCB2 501 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 SPRYD4Q8WW59 207 aaPredicted RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 KLHDC7BQ96G42 594 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 GAL3ST4Q96RP7 486 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PINK1Q9BXM7 581 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 MMP28Q9H239 520 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 NT5DC2Q9H857 520 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 RMI1Q9H9A7 625 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 TMEM165Q9HC07 324 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PLCXD1Q9NUJ7 323 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 OR10H1Q9Y4A9 318 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 HEBP2Q9Y5Z4 205 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 IGHV5-51A0A0C4DH38 117 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 ANKRD61A6NGH8 418 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 E9PI62 339 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 UBXN7O94888 489 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 WISP1O95388 367 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 PPP1R3DO95685 299 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 ZGLP1P0C6A0 271 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CRYBB2P43320 205 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 FABP5Q01469 135 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 PLAURQ03405 335 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SLC3A1Q07837 685 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SFSWAPQ12872 951 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 LARS2Q15031 903 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 C1orf94Q6P1W5 598 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 OR4K13Q8NH42 304 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 BAHD1Q8TBE0 780 aaPredicted RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 DMRTB1Q96MA1 342 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TNFRSF13CQ96RJ3 184 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CDCA3Q99618 268 aaPredicted RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SPATA5L1Q9BVQ7 753 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 PRRG3Q9BZD7 231 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 OR52D1Q9H346 318 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CACYBPQ9HB71 228 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CHCHD3Q9NX63 227 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 KCNK2O95069 426 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 NGFRP08138 427 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 ALOX5P09917 674 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 DRD1P21728 446 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TEAD1P28347 426 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF136P52737 540 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SPANXN2Q5MJ10 180 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TTLL10Q6ZVT0 673 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 RNF44Q7L0R7 432 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 OOSP2Q86WS3 158 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 MCATQ8IVS2 390 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CA13Q8N1Q1 262 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 C10orf53Q8N6V4 93 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CLDN22Q8N7P3 220 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TSTD1Q8NFU3 115 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SERINC2Q96SA4 455 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SLC38A3Q99624 504 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 FUZQ9BT04 418 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 WDR12Q9GZL7 423 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 OR8D2Q9GZM6 311 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 KLHL1Q9NR64 748 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 H2AFY2Q9P0M6 372 aaPredicted RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SIRT4Q9Y6E7 314 aaPredicted RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TTC28Q96AY4 2481 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 A0A0B4J203 849 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 GPR89AB7ZAQ6 455 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 E9PQ18 207 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CYR61O00622 381 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 FCER2P06734 321 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 GPR89BP0CG08 455 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 FXYD6P3P58550 94 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 CRYZQ08257 329 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 OXA1LQ15070 435 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 RAB30Q15771 203 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 SDR9C7Q8NEX9 313 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 RASSF5Q8WWW0 418 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TSSK2Q96PF2 358 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TRNT1Q96Q11 434 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TTYH1Q9H313 450 aaPredicted RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TXNL4BQ9NX01 149 aaKnown RBP11.06□□□□□ -0.64
PTPRN-204ENST00000423636 MMP17Q9ULZ9 603 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 TSC22D4Q9Y3Q8 395 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 MTCH2Q9Y6C9 303 aa11.06□□□□□ -0.64
PTPRN-204ENST00000423636 IGHV3-20A0A0C4DH32 117 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 SPTY2D1-AS1A0A0U1RR47 76 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 A0A1B0GVT2 93 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 H7C1C5 153 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 DCNP07585 359 aaKnown RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 NR4A2P43354 598 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 LCN6P62502 163 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 KIR2DS3Q14952 304 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ARL9Q6T311 187 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 SLC22A18Q96BI1 424 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ANKRD9Q96BM1 317 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ZMYND19Q96E35 227 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-204ENST00000423636 UBQLN3Q9H347 655 aa11.05□□□□□ -0.64
PTPRN-204ENST00000423636 ANKHQ9HCJ1 492 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms