RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ODF1Q14990 250 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 UGCGQ16739 394 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PRAMEF20Q5VT98 475 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SPESP1Q6UW49 350 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF595Q8IYB9 648 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 RASGEF1CQ8N431 466 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TCEANCQ8N8B7 351 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PNLDC1Q8NA58 520 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM161BQ8NDZ6 487 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR2Y1Q8NGV0 311 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CREB3L1Q96BA8 519 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF707Q96C28 371 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 C1QTNF3Q9BXJ4 246 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SHCBP1LQ9BZQ2 653 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FOLH1BQ9HBA9 442 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PPM1HQ9ULR3 514 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NME7Q9Y5B8 376 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ST14Q9Y5Y6 855 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 EFCAB10A6NFE3 127 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FAM187AA6NFU0 413 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 POC1B-GALNT4F8VUJ3 575 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF195O14628 629 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MAGEB4O15481 346 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TNFRSF21O75509 655 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CNIH1O95406 144 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PORP16435 677 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 VDAC1P21796 283 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ADRA1BP35368 520 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OPRD1P41143 372 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC15A1P46059 708 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF83P51522 516 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MVDP53602 400 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM267Q0VDI3 215 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CLN3Q13286 438 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TGIF1Q15583 401 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 KCNMB1Q16558 191 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ANKRD55Q3KP44 614 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ARSHQ5FYA8 562 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC35F1Q5T1Q4 408 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ANKRD34AQ69YU3 496 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR52E8Q6IFG1 317 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC25A24Q6NUK1 477 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FAM183BPQ6ZVS7 135 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 USP43Q70EL4 1123 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 EPM2AIP1Q7L775 607 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TGIF2LYQ8IUE0 185 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 C1orf174Q8IYL3 243 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 LNX2Q8N448 690 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 LINC01356Q8N9X3 169 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 C1orf216Q8TAB5 229 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NUDT16L1Q9BRJ7 211 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ACSS1Q9NUB1 689 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 C1RLQ9NZP8 487 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ABRACLQ9P1F3 81 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SF3B6Q9Y3B4 125 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TRIOBPQ9H2D6 2365 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 A0A087WV48 116 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR14I1A6ND48 311 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SDR42E2A6NKP2 422 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC1A7O00341 560 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC22A2O15244 555 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 HCRTR1O43613 425 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CDC14BO60729 498 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 T-ENOLP0DO92 83 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF20P17024 532 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SOX18P35713 384 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC1A2P43004 574 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC6A8P48029 635 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 HLCSP50747 726 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CDK9P50750 372 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 HNRNPFP52597 415 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC35A1P78382 337 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GALNTL6Q49A17 601 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NKAPLQ5M9Q1 402 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 EXOSC6Q5RKV6 272 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CARD17Q5XLA6 110 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CXorf57Q6NSI4 855 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OLFML1Q6UWY5 402 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PARS2Q7L3T8 475 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NLRP8Q86W28 1048 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 DCBLD1Q8N8Z6 715 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR4N2Q8NGD1 307 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FAM57AQ8TBR7 257 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC35F5Q8WV83 523 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SH3YL1Q96HL8 342 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FAM46AQ96IP4 442 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 LRR1Q96L50 414 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 KCNC2Q96PR1 638 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 Q9H521 79 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MMP26Q9NRE1 261 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CKLFQ9UBR5 152 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GPR52Q9Y2T5 361 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MED16Q9Y2X0 877 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF785A8K8V0 405 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 G3V3Y1 287 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TSC22D2O75157 780 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PRKRAO75569 313 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SULT1C4O75897 302 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms