RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TMEM171Q8WVE6 324 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 ARSGQ96EG1 525 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 CHMP6Q96FZ7 201 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 SH3YL1Q96HL8 342 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-205ENST00000423214 TSSK3Q96PN8 268 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 REEP4Q9H6H4 257 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 TMEM185BQ9H7F4 350 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 GLRX2Q9NS18 164 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 OXSMQ9NWU1 459 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 ZANQ9Y493 2812 aa14.47□□□□□ -0.09
COL18A1-205ENST00000423214 CHD3Q12873 2000 aaKnown RBP14.46□□□□□ -0.09
COL18A1-205ENST00000423214 A0A1W2PRB8 838 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 C7orf72A4D263 438 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 KCNK2O95069 426 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 TUBBP07437 444 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 ALOX5P09917 674 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 PTH2RP49190 550 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 PRIM2P49643 509 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 IFFO1Q0D2I5 559 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 KIAA0040Q15053 153 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL18A1-205ENST00000423214 PLPPR5Q32ZL2 321 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 HBMQ6B0K9 141 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 MFSD12Q6NUT3 480 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 ZNF704Q6ZNC4 412 aaPredicted RBP14.46□□□□□ -0.09
COL18A1-205ENST00000423214 ESPNLQ6ZVH7 1005 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 WFDC8Q8IUA0 241 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 C10orf107Q8IVU9 208 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 OR4C3Q8NH37 302 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 OR2V1Q8NHB1 315 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 PPP1R14CQ8TAE6 165 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 GSX2Q9BZM3 304 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 ACTR6Q9GZN1 396 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 PLSCR4Q9NRQ2 329 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 MED17Q9NVC6 651 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 CCL27Q9Y4X3 112 aa14.46□□□□□ -0.09
COL18A1-205ENST00000423214 TRIM64A6NGJ6 449 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 TRIM64BA6NI03 449 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 NPIPB8E9PQR5 432 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 AZIN1O14977 448 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 ZNF500O60304 480 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 TBX19O60806 448 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 SPAG7O75391 227 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 OPN1LWP04000 364 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 LOXP28300 417 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 PCSK6P29122 969 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 LCN1P31025 176 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 HPCAL1P37235 193 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 MAP3K8P41279 467 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 ASMTP46597 345 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 SERPINB4P48594 390 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 RAC1P63000 192 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 PPP2R2BQ00005 443 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 DUSP5Q16690 384 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 CTU2Q2VPK5 515 aaKnown RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 GALNTL6Q49A17 601 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 CSPG4Q6UVK1 2322 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 STAC2Q6ZMT1 411 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 SLC16A11Q8NCK7 471 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 ACTRT2Q8TDY3 377 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 AENQ8WTP8 325 aaKnown RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 HOXB13Q92826 284 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 OTUB1Q96FW1 271 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 REXO5Q96IC2 774 aaKnown RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 ADGRG7Q96K78 797 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 FCRL1Q96LA6 429 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 CXorf56Q9H5V9 222 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 C12orf49Q9H741 205 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 UBQLN4Q9NRR5 601 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 ACSS1Q9NUB1 689 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-205ENST00000423214 TMED5Q9Y3A6 229 aa14.45□□□□□ -0.1
COL18A1-205ENST00000423214 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 HSPA4LO95757 839 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 NUDT14O95848 222 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 THBDP07204 575 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 NUDT17P0C025 328 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 EFNA1P20827 205 aaPredicted RBP14.44□□□□□ -0.1
COL18A1-205ENST00000423214 ATP6V1C1P21283 382 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 AGTR1P30556 359 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 SFTPDP35247 375 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 FRKP42685 505 aaPredicted RBP14.44□□□□□ -0.1
COL18A1-205ENST00000423214 POU6F2P78424 691 aaPredicted RBP14.44□□□□□ -0.1
COL18A1-205ENST00000423214 PDE7AQ13946 482 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 PCLAFQ15004 111 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 CCNJQ5T5M9 372 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 GTF2IRD2BQ6EKJ0 949 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 C22orf34Q6ZV56 151 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 R3HCC1LQ7Z5L2 792 aaKnown RBP14.44□□□□□ -0.1
COL18A1-205ENST00000423214 ZAR1Q86SH2 424 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 GTF2IRD2Q86UP8 949 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 TRABD2AQ86V40 505 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 DDIASQ8IXT1 998 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 ZNF527Q8NB42 609 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 OR2T11Q8NH01 316 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 B4GALNT2Q8NHY0 566 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 MTERF3Q96E29 417 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 GIMAP5Q96F15 307 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 PLPPR2Q96GM1 343 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 KLHL15Q96M94 604 aa14.44□□□□□ -0.1
COL18A1-205ENST00000423214 NPAS1Q99742 590 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms