RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 ARHGAP11BQ3KRB8 267 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 FAM174BQ3ZCQ3 159 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 EEF1A1P5Q5VTE0 462 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 RAET1LQ5VY80 246 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 ANKRD46Q86W74 232 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 CLEC4FQ8N1N0 589 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 OR4A15Q8NGL6 344 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 OR5M1Q8NGP8 315 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
LINC01840-201ENST00000421870 CHMP6Q96FZ7 201 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 ATP6V1G3Q96LB4 118 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 MCCC2Q9HCC0 563 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 MARCOQ9UEW3 520 aaPredicted RBP13.38□□□□□ -0.27
LINC01840-201ENST00000421870 BTNL2Q9UIR0 455 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 FOXD3Q9UJU5 478 aaPredicted RBP13.38□□□□□ -0.27
LINC01840-201ENST00000421870 L3MBTL1Q9Y468 752 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 HEATR5AQ86XA9 2040 aa13.38□□□□□ -0.27
LINC01840-201ENST00000421870 CSMD2Q7Z408 3487 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 MPDZO75970 2070 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 GOLGA8QA0A0J9YX86 632 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 RNF103-CHMP3A0A140T963 221 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 GOLGA8OA6NCC3 632 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 GOLGA8NF8WBI6 632 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 H0YC42 278 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 CPSF4O95639 269 aaKnown RBP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 TGM6O95932 706 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 AK1P00568 194 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 ZNF17P17021 662 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 POU3F2P20265 443 aaPredicted RBP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 S100A3P33764 101 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 SOAT1P35610 550 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 PEX19P40855 299 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 AGFG1P52594 562 aaKnown RBP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 TPD52P55327 224 aaPredicted RBP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 TLE4Q04727 773 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 FLYWCH1Q4VC44 716 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 SAXO2Q658L1 398 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 HEPHL1Q6MZM0 1159 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 PLXDC2Q6UX71 529 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 MAVSQ7Z434 540 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 GTPBP8Q8N3Z3 284 aaPredicted RBP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 MEIOBQ8N635 442 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 GATSQ8NAP1 163 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 ZNF527Q8NB42 609 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 GLB1L3Q8NCI6 653 aaPredicted RBP13.37□□□□□ -0.27
LINC01840-201ENST00000421870 B4GALNT2Q8NHY0 566 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 ZBTB8AQ96BR9 441 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 LRRC46Q96FV0 321 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 LURAP1Q96LR2 239 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 CCDC115Q96NT0 180 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 KLHDC3Q9BQ90 382 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 SFXN3Q9BWM7 321 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 STOML1Q9UBI4 398 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 DTNAQ9Y4J8 743 aa13.37□□□□□ -0.27
LINC01840-201ENST00000421870 ABCA12Q86UK0 2595 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 H3BML4 177 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 GMFGO60234 142 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 FCMRO60667 390 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 STX11O75558 287 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 AGR2O95994 175 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 PGRP06401 933 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 CRHP06850 196 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 LINGO3P0C6S8 592 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 IDO1P14902 403 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 H2AFXP16104 143 aaPredicted RBP13.36□□□□□ -0.27
LINC01840-201ENST00000421870 CAPN3P20807 821 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 NME5P56597 212 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 CLDN20P56880 219 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 KRTAP10-9P60411 292 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 RPS26P62854 115 aaKnown RBP13.36□□□□□ -0.27
LINC01840-201ENST00000421870 LRRC74AQ0VAA2 488 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 PLPPR5Q32ZL2 321 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 SLC9B1Q4ZJI4 515 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 TTMPQ5BVD1 217 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 CBLN3Q6UW01 205 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 CHMP1BQ7LBR1 199 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 HDXQ7Z353 690 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 GGNQ86UU5 652 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 UBQLNLQ8IYU4 475 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 INTS12Q96CB8 462 aaKnown RBP13.36□□□□□ -0.27
LINC01840-201ENST00000421870 NEURL3Q96EH8 262 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 SLC35G5Q96KT7 338 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 NPAS1Q99742 590 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 SAP130Q9H0E3 1048 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 OR51I1Q9H343 314 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 MED17Q9NVC6 651 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 VDAC3Q9Y277 283 aa13.36□□□□□ -0.27
LINC01840-201ENST00000421870 CSMD1Q96PZ7 3565 aa13.35□□□□□ -0.27
LINC01840-201ENST00000421870 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.35□□□□□ -0.27
LINC01840-201ENST00000421870 NPIPA5A0A0B4J1W7 369 aa13.35□□□□□ -0.27
LINC01840-201ENST00000421870 SHISA8B8ZZ34 492 aa13.35□□□□□ -0.27
LINC01840-201ENST00000421870 NPIPA7E9PJI5 369 aa13.35□□□□□ -0.27
LINC01840-201ENST00000421870 H3BNH8 94 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms