RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CENPOQ9BU64 300 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 FBXL2Q9UKC9 423 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 OR1A2Q9Y585 309 aa11.65□□□□□ -0.54
CLCN4-203ENST00000421085 GABRR3A8MPY1 467 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 ADH1BP00325 375 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 RAB4AP20338 218 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 THBS2P35442 1172 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 AHRP35869 848 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 PRPS1P60891 318 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 HTD2P86397 168 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 SQSTM1Q13501 440 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 NHSL2Q5HYW2 709 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 UBE2NLQ5JXB2 153 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 MEX3BQ6ZN04 569 aaKnown RBP11.65□□□□□ -0.55
CLCN4-203ENST00000421085 GKN2Q86XP6 184 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 OR7G3Q8NG95 312 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 OR56B4Q8NH76 319 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 TMEM239Q8WW34 195 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 BABAM2Q9NXR7 383 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 CA5BQ9Y2D0 317 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 NAALAD2Q9Y3Q0 740 aa11.65□□□□□ -0.55
CLCN4-203ENST00000421085 LILRB5O75023 590 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ACP2P11117 423 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 MSX1P28360 303 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 PCSK6P29122 969 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SPINT3P49223 89 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SGCZQ96LD1 299 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 DNTTIP1Q9H147 329 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 RHBDD3Q9Y3P4 386 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 TOR1AO14656 332 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 PEX14O75381 377 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SERPINA5P05154 406 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 GYPBP06028 91 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 DAPP51397 102 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SSTP61278 116 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 CSNK1A1LQ8N752 337 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 OR10K1Q8NGX5 313 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 MVB12BQ9H7P6 319 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 TMEM100Q9NV29 134 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ACTL7AQ9Y615 435 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 C3P01024 1663 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 MYH15Q9Y2K3 1946 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 MYH3P11055 1940 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 FAM183AA6NL82 134 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 TNFRSF10AO00220 468 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 FBXO24O75426 580 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SERPINA7P05543 415 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 NFYAP23511 347 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 CD79BP40259 229 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF169Q14929 603 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 GRASPQ7Z6J2 395 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 OR1S1Q8NH92 325 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 PRRC1Q96M27 445 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 CLMPQ9H6B4 373 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ABRACLQ9P1F3 81 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 A0A0D9SG52 128 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 DVL2O14641 736 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 NPC1O15118 1278 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 HOXB2P14652 356 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 POLR2IP36954 125 aaKnown RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 GATMP50440 423 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 GSTM4Q03013 218 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF33BQ06732 778 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 FAPQ12884 760 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 UBXN2BQ14CS0 331 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 RFPL4BQ6ZWI9 263 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 LYSMD2Q8IV50 215 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF619Q8N2I2 560 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 RBPMSQ93062 196 aaKnown RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SPIN2AQ99865 258 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SPIN2BQ9BPZ2 258 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 CNTNAP3Q9BZ76 1288 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 GMPR2Q9P2T1 348 aaKnown RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 MYH2Q9UKX2 1941 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 A0A0U1RQS6 177 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 KLK3P07288 261 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 TCTE1Q5JU00 501 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 KIAA0319Q5VV43 1072 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 LACC1Q8IV20 430 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 ADAMTS16Q8TE57 1224 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 SAMD10Q9BYL1 202 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 PLEKHJ1Q9NW61 149 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 RBFOX1Q9NWB1 397 aaKnown RBP11.64□□□□□ -0.55
CLCN4-203ENST00000421085 KIF1AQ12756 1690 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 CAMTA1Q9Y6Y1 1673 aa11.64□□□□□ -0.55
CLCN4-203ENST00000421085 UGDHO60701 494 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 SEC14L2O76054 403 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 EGFP01133 1207 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 HOXB9P17482 250 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 MC3RP41968 323 aa11.63□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
CLCN4-203ENST00000421085 TAGLNQ01995 201 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms