RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 NKX2-2O95096 273 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 OXSR1O95747 527 aaPredicted RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 ADAP00813 363 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 NGFRP08138 427 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 PTNP21246 168 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 EDNRAP25101 427 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 MANFP55145 182 aaKnown RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 FOXA1P55317 472 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 CARD18P57730 90 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 SLC7A5Q01650 507 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 SLC18A2Q05940 514 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 C6orf52Q5T4I8 152 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 ZNF551Q7Z340 670 aaPredicted RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 GATSQ8NAP1 163 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 ACTRT2Q8TDY3 377 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 ZBTB8AQ96BR9 441 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 GIMAP5Q96F15 307 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 RAB17Q9H0T7 212 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 ESRP2Q9H6T0 727 aaKnown RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 LRTM1Q9HBL6 345 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 FANCFQ9NPI8 374 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 DDX18Q9NVP1 670 aaKnown RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 TMEM216Q9P0N5 145 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 STOML1Q9UBI4 398 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 MRTO4Q9UKD2 239 aaKnown RBP12.63□□□□□ -0.39
NFE4-201ENST00000420058 A0A1W2PP18 115 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 TRIM49D1C9J1S8 452 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 NDUFB5O43674 189 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 C8BP07358 591 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 IFI6P09912 130 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 IMPDH1P20839 514 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 GSTM5P46439 218 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 PSMD4P55036 377 aaKnown RBP12.62□□□□□ -0.39
NFE4-201ENST00000420058 SLC29A2Q14542 456 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 ZNF239Q16600 458 aaKnown RBP12.62□□□□□ -0.39
NFE4-201ENST00000420058 TMEM249Q2WGJ8 235 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 GLE1Q53GS7 698 aaKnown RBP12.62□□□□□ -0.39
NFE4-201ENST00000420058 EXOSC6Q5RKV6 272 aaKnown RBP12.62□□□□□ -0.39
NFE4-201ENST00000420058 TRABD2AQ86V40 505 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 LILRA2Q8N149 483 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 EGLN2Q96KS0 407 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 KLHL15Q96M94 604 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 PAFAH2Q99487 392 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 MYNNQ9NPC7 610 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
NFE4-201ENST00000420058 NTMQ9P121 344 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 PYCARDQ9ULZ3 195 aa12.62□□□□□ -0.39
NFE4-201ENST00000420058 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 UBFD1O14562 309 aaKnown RBP12.61□□□□□ -0.39
NFE4-201ENST00000420058 OIP5O43482 229 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 SSX4O60224 188 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 KCNK2O95069 426 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 INHBAP08476 426 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 HMOX2P30519 316 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 PRIM2P49643 509 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 C21orf58P58505 322 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 IRX1P78414 480 aaPredicted RBP12.61□□□□□ -0.39
NFE4-201ENST00000420058 ZNF763Q0D2J5 394 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 P2RY6Q15077 328 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
NFE4-201ENST00000420058 CD226Q15762 336 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 GTF2IRD2BQ6EKJ0 949 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 GTF2IRD2Q86UP8 949 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 GPR151Q8TDV0 419 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 SH3YL1Q96HL8 342 aaPredicted RBP12.61□□□□□ -0.39
NFE4-201ENST00000420058 TNFRSF13CQ96RJ3 184 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 C3orf14Q9HBI5 128 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 KLHL13Q9P2N7 655 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 CCL27Q9Y4X3 112 aa12.61□□□□□ -0.39
NFE4-201ENST00000420058 GOLGA8QA0A0J9YX86 632 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 FAM234BA2RU67 622 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 GOLGA8OA6NCC3 632 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ELOA3DA6NLF2 546 aaPredicted RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 TTC36A6NLP5 189 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 NPIPB8E9PQR5 432 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 GOLGA8NF8WBI6 632 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 GOLGA8RI6L899 631 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 KCNH1O95259 989 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 YES1P07947 543 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ACP2P11117 423 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 PRPS2P11908 318 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ENPP1P22413 925 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 IL32P24001 234 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 PHBP35232 272 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 SFTPDP35247 375 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 SERPINB9P50453 376 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 PRKAA2P54646 552 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 VLDLRP98155 873 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 ITGADQ13349 1161 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 KIAA0040Q15053 153 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ELOA3BQ3SY89 546 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms