RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FAM32AQ9Y421 112 aaKnown RBP13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 V9GYQ6 96 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 CENPVL1A0A0U1RR11 272 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 SCDO00767 359 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 RRP8O43159 456 aaKnown RBP13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OXSR1O95747 527 aaPredicted RBP13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 CYP4B1P13584 511 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF26P17031 533 aaPredicted RBP13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 FPR1P21462 350 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OTX2P32243 289 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR1E2P47887 323 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ARHGDIAP52565 204 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF136P52737 540 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 MLF1P58340 268 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 AIMP2Q13155 320 aaKnown RBP13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 NPTX1Q15818 432 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 COL28A1Q2UY09 1125 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 COLEC12Q5KU26 742 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OPN5Q6U736 354 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OLIG3Q7RTU3 272 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF550Q7Z398 422 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 AMIGO2Q86SJ2 522 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZDHHC13Q8IUH4 622 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OFCC1Q8IZS5 231 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR4D11Q8NGI4 311 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 TMCO6Q96DC7 493 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 PRRC1Q96M27 445 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 RDH12Q96NR8 316 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 LMF1Q96S06 567 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 RASL10BQ96S79 203 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ADOQ96SZ5 270 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 FUZQ9BT04 418 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 KLHL4Q9C0H6 718 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 SH2D2AQ9NP31 389 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 ACER3Q9NUN7 267 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 DNAJB12Q9NXW2 375 aaKnown RBP13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 A4GNTQ9UNA3 340 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
SHMT1P1-201ENST00000419974 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 H3BNH8 94 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 hCG_2039718K7EN88 272 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 ADAM10O14672 748 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 FFAR1O14842 300 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 TLX3O43711 291 aaPredicted RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 EIF4E2O60573 245 aaKnown RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 TPST2O60704 377 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 UGT2B11O75310 529 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 REM1O75628 298 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR5F1O95221 314 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 RASAL1O95294 804 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 HPRP00739 348 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 LIFP15018 202 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 PEX2P28328 305 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 Q0VFX4 171 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 NNATQ16517 81 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 GRAMD1BQ3KR37 738 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 DCAF10Q5QP82 559 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF613Q6PF04 617 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 C19orf48Q6RUI8 117 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 RANBP3LQ86VV4 465 aaPredicted RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 RPS19BP1Q86WX3 136 aaKnown RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 LINC00471Q8N535 108 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 POGLUT1Q8NBL1 392 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 PSMF1Q92530 271 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 EME1Q96AY2 570 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 EFHD2Q96C19 240 aaPredicted RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 SGCZQ96LD1 299 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 FRMD6Q96NE9 622 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 CCNL2Q96S94 520 aaPredicted RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 WFDC6Q9BQY6 131 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 DPH1Q9BZG8 443 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 VCXQ9H320 206 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 REEP1Q9H902 201 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 NMNAT1Q9HAN9 279 aaPredicted RBP13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 OAZ3Q9UMX2 235 aa13.09□□□□□ -0.31
SHMT1P1-201ENST00000419974 ANKRD33BA6NCL7 494 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 G3V2T6 193 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 GNGT2O14610 69 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 ICOSLGO75144 302 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 ITGA10O75578 1167 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 OR2J2O76002 312 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 MT-ND1P03886 318 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 HPGDP15428 266 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 IFNA8P32881 189 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 EVI2BP34910 448 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 SLC6A8P48029 635 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 CLK3P49761 638 aaKnown RBP13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 DLX5P56178 289 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 RPP38P78345 283 aaKnown RBP13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 CLN3Q13286 438 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 APOOLQ6UXV4 268 aa13.08□□□□□ -0.32
SHMT1P1-201ENST00000419974 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms