RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 NLGN4XQ8N0W4 816 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 CACTIN-AS1Q8N1I8 211 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 GALNT15Q8N3T1 639 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 DHRSXQ8N5I4 330 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF321PQ8N8H1 164 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 SETD9Q8NE22 299 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 TOR1AIP2Q8NFQ8 470 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 NLGN4YQ8NFZ3 816 aaPredicted RBP5.5□□□□□ -1.53
HMGB3-202ENST00000419110 OR5L2Q8NGL0 311 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 OR6T1Q8NGN1 323 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 OR8K3Q8NH51 312 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 PIGXQ8TBF5 258 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 DIO2Q92813 273 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 SLC38A4Q969I6 547 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 KIAA1143Q96AT1 154 aaPredicted RBP5.5□□□□□ -1.53
HMGB3-202ENST00000419110 OMA1Q96E52 524 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 DHRS1Q96LJ7 313 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 CNBD2Q96M20 576 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF570Q96NI8 536 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 MCHR1Q99705 422 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 PSD2Q9BQI7 771 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF559Q9BR84 538 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 ANKRD60Q9BZ19 345 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 TBL1XR1Q9BZK7 514 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 RIBC2Q9H4K1 309 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 NTN4Q9HB63 628 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 HHATLQ9HCP6 504 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 PAPOLBQ9NRJ5 636 aaKnown RBP5.5□□□□□ -1.53
HMGB3-202ENST00000419110 UBQLN4Q9NRR5 601 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 FOXJ2Q9P0K8 574 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 RPS6KB2Q9UBS0 482 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 ACAD8Q9UKU7 415 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 PADI1Q9ULC6 663 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 PPIEQ9UNP9 301 aaKnown RBP5.5□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF292O60281 2723 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 RIF1Q5UIP0 2472 aaKnown RBP5.5□□□□□ -1.53
HMGB3-202ENST00000419110 KNTC1P50748 2209 aa5.5□□□□□ -1.53
HMGB3-202ENST00000419110 IGHV1-45A0A0A0MS14 117 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 CENPVL1A0A0U1RR11 272 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 A0A1W2PRQ8 180 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PMS2P1A4D2B8 440 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TRAPPC13A5PLN9 417 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 SERINC4A6NH21 518 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 OR6C70A6NIJ9 312 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 CPSF4LA6NMK7 179 aaKnown RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NPIPB9F8W1W9 429 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 H0YAE9 185 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 J3KTA2 159 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 OR10H3O60404 316 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 FCMRO60667 390 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ICOSLGO75144 302 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 REM1O75628 298 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PPM1BO75688 479 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ZFAND5O76080 213 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TNFSF15O95150 251 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TNFAIP8O95379 198 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 UTS2O95399 124 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 HPP00738 406 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 CSTAP01040 98 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 IGKV1D-16P01601 117 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 UMODP07911 640 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NGFRP08138 427 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 UBTFL6P0CB48 400 aaPredicted RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 CYP4B1P13584 511 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 CEACAM1P13688 526 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MMP11P24347 488 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ABCD3P28288 659 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 EVI2BP34910 448 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 DLSTP36957 453 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 STAT5AP42229 794 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 YAP1P46937 504 aaKnown RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 SLC6A8P48029 635 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 RPS6KA3P51812 740 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NUP107P57740 925 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 FOXL2P58012 376 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 COPZ1P61923 177 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 RNF4P78317 190 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 RPP38P78345 283 aaKnown RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MERTKQ12866 999 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 IL18R1Q13478 541 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 DGCR6Q14129 220 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PUM1Q14671 1186 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NPTX1Q15818 432 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ENTPD8Q5MY95 495 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TTC23Q5W5X9 447 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PLAG1Q6DJT9 500 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 LCN10Q6JVE6 187 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TCTN3Q6NUS6 607 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 FAHD1Q6P587 224 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 FAM199XQ6PEV8 388 aaPredicted RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF613Q6PF04 617 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF730Q6ZMV8 503 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ZAR1Q86SH2 424 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 COMTD1Q86VU5 262 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 GRAMD2AQ8IUY3 354 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MISPQ8IVT2 679 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 DND1Q8IYX4 353 aaKnown RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PRR22Q8IZ63 422 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 HS3ST5Q8IZT8 346 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms