RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PTBP3O95758 552 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ANXA4P09525 319 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 GSTT2P0CG29 244 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 GSTT2BP0CG30 244 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 IGLL1P15814 213 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 VDAC1P21796 283 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 CCNE1P24864 410 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 RPL29P47914 159 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 NOVA1P51513 510 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ATXN3P54252 364 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 MRPS11P82912 194 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF45Q02386 682 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 GABPB1Q06547 395 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ST3GAL3Q11203 375 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 EXOSC2Q13868 293 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF630Q2M218 657 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 CCDC40Q4G0X9 1142 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 CELF3Q5SZQ8 465 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 KHDRBS2Q5VWX1 349 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR5M10Q6IEU7 315 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 WASH2PQ6VEQ5 465 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 PPP1R42Q7Z4L9 355 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 IFNEQ86WN2 208 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ELMOD2Q8IZ81 293 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 HDDC3Q8N4P3 179 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 MRPL43Q8N983 215 aaKnown RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 CNNM3Q8NE01 707 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR56B1Q8NGI3 324 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 NCLNQ969V3 563 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 UPRTQ96BW1 309 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 TRIM44Q96DX7 344 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 C16orf45Q96MC5 204 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 CNPY3Q9BT09 278 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 CAB39LQ9H9S4 337 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR1A1Q9P1Q5 309 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 RIMS3Q9UJD0 308 aa2.84□□□□□ -1.95
HMGB1P49-201ENST00000418882 ATP8B3O60423 1300 aa2.84□□□□□ -1.96
HMGB1P49-201ENST00000418882 ATAD2BQ9ULI0 1458 aa2.84□□□□□ -1.96
HMGB1P49-201ENST00000418882 LTBP1Q14766 1721 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 CABYRO75952 493 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ANP32DO95626 131 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 HEXBP07686 556 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 OR8U8P0C7N1 319 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 RALAP11233 206 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 NR2C1P13056 603 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF17P17021 662 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 FUT1P19526 365 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 UCNP55089 124 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 OC90Q02509 493 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ELAVL3Q14576 367 aaKnown RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 MAJINQ3KP22 176 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF658BQ4V348 819 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 NEK5Q6P3R8 708 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 TMEM184AQ6ZMB5 413 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 LPCAT2Q7L5N7 544 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 MIER3Q7Z3K6 550 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 LINC01561Q8N1V8 128 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF433Q8N7K0 673 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 M1APQ8TC57 530 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 COMMD4Q9H0A8 199 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 GLIPR2Q9H4G4 154 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ROPN1Q9HAT0 212 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 RBM28Q9NW13 759 aaKnown RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 PAK1IP1Q9NWT1 392 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 GALPQ9UBC7 116 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 GMPPBQ9Y5P6 360 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 CLCA3PQ9Y6N3 262 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 AP1M2Q9Y6Q5 423 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 PARD3Q8TEW0 1356 aa2.83□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF705EA8MWA4 302 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 LGALS8O00214 317 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 MPHOSPH10O00566 681 aaKnown RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 NDC80O14777 642 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 MMP23AO75900 390 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 MT-ATP6P00846 226 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 TGFAP01135 160 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF32P17041 273 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 IL10P22301 178 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 ACAA2P42765 397 aaKnown RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 EMDP50402 254 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 DAZ2Q13117 558 aaKnown RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 AANATQ16613 207 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 TOR1AIP1Q5JTV8 583 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 C12orf60Q5U649 245 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 Q6P435 159 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF589Q86UQ0 364 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 PPP1R27Q86WC6 154 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 EFCAB13Q8IY85 973 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 TRUB1Q8WWH5 349 aaKnown RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 NEIL2Q969S2 332 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 SYAP1Q96A49 352 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 VPS39Q96JC1 886 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 ELMO2Q96JJ3 720 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 FAM111AQ96PZ2 611 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 TESK2Q96S53 571 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 SDHCQ99643 169 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 RNF126Q9BV68 326 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 NMNAT2Q9BZQ4 307 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 POLR3FQ9H1D9 316 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 RPAP3Q9H6T3 665 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms