RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 C16orf52Q8NHV5 167 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 RHOXF1Q8NHV9 184 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 FAM110BQ8TC76 370 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 STT3BQ8TCJ2 826 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 VSTM2LQ96N03 204 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 MND1Q9BWT6 205 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 ITPAQ9BY32 194 aa7.78□□□□□ -1.16
USP54-203ENST00000418501 GPR55Q9Y2T6 319 aaPredicted RBP7.78□□□□□ -1.16
USP54-203ENST00000418501 MYO10Q9HD67 2058 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TCRBV16S1A1N1A0A5B0 115 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 D6RAR5 112 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 PEX12O00623 359 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 ZNF264O43296 627 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TPST2O60704 377 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 CHMP24386 653 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 SSTR4P31391 388 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 RANBP1P43487 201 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 ALDH3B2P48448 385 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 GSSP48637 474 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 SUMO3P55854 103 aaPredicted RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 RPS7P62081 194 aaKnown RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 FOXB2Q5VYV0 432 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 GDF7Q7Z4P5 450 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 BCORP1Q8N888 145 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 HAVCR2Q8TDQ0 301 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 IFT27Q9BW83 186 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 LAT2Q9GZY6 243 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 SERHL2Q9H4I8 314 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 PTGES2Q9H7Z7 377 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 A4GNTQ9UNA3 340 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 MAGED1Q9Y5V3 778 aaPredicted RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 TRIOBPQ9H2D6 2365 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 ZAR1LA6NP61 321 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 J3KTA2 159 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 GCM2O75603 506 aaPredicted RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 ZGLP1P0C6A0 271 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 FGF5P12034 268 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 DCKP27707 260 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 ADH7P40394 386 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 CENPAP49450 140 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 MAP2K6P52564 334 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 SLC26A5P58743 744 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 NUP54Q7Z3B4 507 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 HDDC2Q7Z4H3 204 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TMEM179BQ7Z7N9 219 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 RAB43Q86YS6 212 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 PSD4Q8NDX1 1056 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 B3GNT7Q8NFL0 401 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 OTULINQ96BN8 352 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 IP6K3Q96PC2 410 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TMEM9BQ9NQ34 198 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 FBXO8Q9NRD0 319 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 IGHV5-10-1A0A0J9YXX1 117 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 IDH3BO43837 385 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 CLIC3O95833 236 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 NGFRP08138 427 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 GNAO1P09471 354 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TSPAN19P0C672 248 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 GIPRP48546 466 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 NR0B1P51843 470 aaKnown RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 EEF1A1P68104 462 aaKnown RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 BTG2P78543 158 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 ERV3-1Q14264 604 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 PUM1Q14671 1186 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP54-203ENST00000418501 OPN5Q6U736 354 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 P2RY8Q86VZ1 359 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 NRMQ8IXM6 262 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TTC9Q92623 222 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 NMD3Q96D46 503 aaKnown RBP7.77□□□□□ -1.17
USP54-203ENST00000418501 TAPBPLQ9BX59 468 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 ARRDC1-AS1Q9H2J1 176 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 FN3KQ9H479 309 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 VNN3Q9NY84 501 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 TEKT2Q9UIF3 430 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 RNF6Q9Y252 685 aa7.77□□□□□ -1.17
USP54-203ENST00000418501 A0A1W2PQD3 144 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 UTS2O95399 124 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 RAB36O95755 333 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 NR2C1P13056 603 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 TBXA2RP21731 343 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 RPS4Y1P22090 263 aaKnown RBP7.76□□□□□ -1.17
USP54-203ENST00000418501 RUNX1T1Q06455 604 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 TBCEQ15813 527 aaPredicted RBP7.76□□□□□ -1.17
USP54-203ENST00000418501 CCNJQ5T5M9 372 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 KLHL17Q6TDP4 642 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 JAZF1Q86VZ6 243 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 NUBPLQ8TB37 319 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 SLC7A13Q8TCU3 470 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 GRHL3Q8TE85 626 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 DIO2Q92813 273 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 UCN3Q969E3 161 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 NECTIN3Q9NQS3 549 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 ATXN7L1Q9ULK2 861 aaPredicted RBP7.76□□□□□ -1.17
USP54-203ENST00000418501 GSTK1Q9Y2Q3 226 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 SAGE2PA6NJ88 616 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 SLC22A31A6NKX4 558 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 CDC40O60508 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
USP54-203ENST00000418501 CASRP41180 1078 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 EMDP50402 254 aa7.76□□□□□ -1.17
USP54-203ENST00000418501 ACTC1P68032 377 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms