RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 KCNE5Q9UJ90 142 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 CDH10Q9Y6N8 788 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 H0Y8X5 98 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 AKR7A2O43488 359 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 RNGTTO60942 597 aaKnown RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 LDB3O75112 727 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PAHP00439 452 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TFPIP10646 304 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 RFX3P48380 749 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 INPP1P49441 399 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 CEBPEQ15744 281 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TMEM240Q5SV17 173 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 THOC7Q6I9Y2 204 aaKnown RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 HEPHL1Q6MZM0 1159 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 THSD4Q6ZMP0 1018 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 NANOGNBQ7Z5D8 188 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 AMIGO1Q86WK6 493 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 SDF2Q99470 211 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TIMM29Q9BSF4 260 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 ALG8Q9BVK2 526 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TEX12Q9BXU0 123 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 SLC17A9Q9BYT1 436 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 MTHFD2LQ9H903 347 aaPredicted RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 GALNT9Q9HCQ5 603 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 CALML5Q9NZT1 146 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 SLC17A4Q9Y2C5 497 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 POM121BA6NF01 834 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 P2RX6O15547 441 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 RNF13O43567 381 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PLOD3O60568 738 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 GYPBP06028 91 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TRAPPC2P0DI81 140 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TRAPPC2BP0DI82 140 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PRKAR1AP10644 381 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PAICSP22234 425 aaKnown RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 FCARP24071 287 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 NOS3P29474 1203 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 RPS7P62081 194 aaKnown RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 E2F1Q01094 437 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 RUNX2Q13950 521 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 YIF1BQ5BJH7 314 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 FBXO42Q6P3S6 717 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 FIGNL1Q6PIW4 674 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 ARL9Q6T311 187 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PRSS41Q7RTY9 318 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PEX5LQ8IYB4 626 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 GJD3Q8N144 294 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 ACBD7Q8N6N7 88 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 BMPERQ8N8U9 685 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 CYB561A3Q8NBI2 242 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 SRFBP1Q8NEF9 429 aaKnown RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 PTP4A1Q93096 173 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 SIDT1Q9NXL6 827 aaKnown RBP13.47□□□□□ -0.25
HDAC9-208ENST00000417496 CLEC4AQ9UMR7 237 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 MAU2Q9Y6X3 613 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 MYO9BQ13459 2157 aa13.47□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3DA0A087WVF3 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3IA0A087WXS9 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3EA0A087X179 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3KA0A087X1G2 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3FA6NER0 549 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3LB9A6J9 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 J3QRE1 110 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 MAGEB4O15481 346 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-208ENST00000417496 CHST10O43529 356 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 HCN1O60741 890 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 CTSVO60911 334 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3HP0C7X1 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 IFI30P13284 250 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 ABATP80404 500 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 SLC3A1Q07837 685 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3GQ6DHY5 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3CQ6IPX1 549 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D3Q8IZP1 549 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-208ENST00000417496 CADM2Q8N3J6 435 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 OR52N1Q8NH53 320 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 OR51A7Q8NH64 312 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 MS4A4EQ96PG1 132 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 KCNJ15Q99712 375 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 RAB11FIP5Q9BXF6 653 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 BABAM2Q9NXR7 383 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 KCMF1Q9P0J7 381 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 PRKAG2Q9UGJ0 569 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 PCDHGB7Q9Y5F8 929 aa13.46□□□□□ -0.25
HDAC9-208ENST00000417496 TRAV27A0A087WT01 109 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 A0A1W2PPK0 400 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 OR5F1O95221 314 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 HLA-DQB1P01920 261 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 GALK2Q01415 458 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 MRPL2Q5T653 305 aaKnown RBP13.46□□□□□ -0.26
HDAC9-208ENST00000417496 CDC73Q6P1J9 531 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 ZC3H14Q6PJT7 736 aaKnown RBP13.46□□□□□ -0.26
HDAC9-208ENST00000417496 LYPD8Q6UX82 237 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 GHDCQ8N2G8 530 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 C17orf47Q8NEP4 570 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 OR13C2Q8NGS9 318 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 FANK1Q8TC84 345 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms