RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NPTNQ9Y639 398 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 NRG2O14511 850 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SOCS6O14544 535 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CBSLP0DN79 551 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CBSP35520 551 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SMAD3P84022 425 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 E2F1Q01094 437 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 GSG1LQ6UXU4 331 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 TPGS1Q6ZTW0 290 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CAMKMTQ7Z624 323 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 LRRTM4Q86VH4 590 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 COMTD1Q86VU5 262 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 XAGE5Q8WWM1 108 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC6A16Q9GZN6 736 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR51I1Q9H343 314 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 ASB6Q9NWX5 421 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC39A1Q9NY26 324 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 PIPOXQ9P0Z9 390 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
NCKIPSD-204ENST00000416649 CD160O95971 181 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 IL3P08700 152 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 BUD31P41223 144 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 AKR1C2P52895 323 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 UBE2MP61081 183 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SEC61A1P61619 476 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 B4GALNT1Q00973 533 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 AKR1C1Q04828 323 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SP140Q13342 867 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SWI5Q1ZZU3 235 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC22A10Q63ZE4 541 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 CDC73Q6P1J9 531 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 CNKSR3Q6P9H4 555 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 HAGHLQ6PII5 290 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 BBS10Q8TAM1 723 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF671Q8TAW3 534 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 AHCYL2Q96HN2 611 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF354BQ96LW1 612 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 TREX2Q9BQ50 279 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ADAT1Q9BUB4 502 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 TTTY10Q9BZA0 68 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 MED11Q9P086 117 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 TRPC4Q9UBN4 977 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 LHX3Q9UBR4 397 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 PURGQ9UJV8 347 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC6A5Q9Y345 797 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 H3BNC9 293 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ABCD4O14678 606 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SMAD6O43541 496 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 CLDN11O75508 207 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 UCHL1P09936 223 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 HOXB1P14653 301 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 GABRA1P14867 456 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SERTAD2Q14140 314 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SYPL1Q16563 259 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 METTL11BQ5VVY1 283 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 AGTRAPQ6RW13 159 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF600Q6ZNG1 722 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 C2orf73Q8N5S3 287 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR5T2Q8NGG2 359 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR13C5Q8NGS8 318 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 GOT1L1Q8NHS2 421 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 C16orf78Q8WTQ4 265 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 NSMAFQ92636 917 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 FAM46AQ96IP4 442 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 PRDM9Q9NQV7 894 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 TDP1Q9NUW8 608 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 MED9Q9NWA0 146 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 CXXC1Q9P0U4 656 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 A0A0G2JPF8 293 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 FAM170BA6NMN3 283 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 HNRNPCL3B7ZW38 293 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ADAM11O75078 769 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 STC2O76061 302 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 UBXN7O94888 489 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 UBL3O95164 117 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 TGM6O95932 706 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 RLN2P04090 185 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SOD2P04179 222 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF806P0C7X5 589 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 HNRNPCL4P0DMR1 293 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 GNSP15586 552 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SYN1P17600 705 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 PSMB1P20618 241 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 C21orf58P58505 322 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 S100A12P80511 92 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 PABPC1L2AQ5JQF8 200 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 TMPRSS9Q7Z410 1059 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 SIRT6Q8N6T7 355 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR10K1Q8NGX5 313 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 RFKQ969G6 155 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 ECHDC3Q96DC8 303 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR1F2PQ96R84 312 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 IFT27Q9BW83 186 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms