RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CDK5R2Q13319 367 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 UGT8Q16880 541 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PLAG1Q6DJT9 500 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ZNF613Q6PF04 617 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 RNF165Q6ZSG1 346 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 CAMKMTQ7Z624 323 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PNPLA1Q8N8W4 532 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 CAPSLQ8WWF8 208 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 SAMD8Q96LT4 415 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 SORBS1Q9BX66 1292 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 LTB4R2Q9NPC1 389 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 MED11Q9P086 117 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 A0A075B6Q4 140 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 TRBV11-1A0A0K0K1C0 115 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 LOC102725191A0A1B0GVB3 256 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 OR6C76A6NM76 312 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 SULT2B1O00204 365 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PLOD2O00469 737 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 STSP08842 583 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 GSTT2P0CG29 244 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 THBS2P35442 1172 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 EIF1AXP47813 144 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 GDI2P50395 445 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 CHAF1BQ13112 559 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ELAVL1Q15717 326 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 FRMPD2BQ6IN97 320 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 LRRC56Q8IYG6 542 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ABHD11Q8NFV4 315 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 SETD6Q8TBK2 473 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 POTEKPQ9BYX7 375 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 DDX31Q9H8H2 851 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 GPN2Q9H9Y4 310 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PARPBPQ9NWS1 579 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 MOKQ9UQ07 419 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 HMX2A2RU54 273 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 FBP2O00757 339 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 EIF4E2O60573 245 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PVALBP20472 110 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 BNIP3Q12983 259 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 CD300LGQ6UXG3 332 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ZNF417Q8TAU3 575 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 HPS1Q92902 700 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 WBP2Q969T9 261 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ZNF583Q96ND8 569 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ZPBPQ9BS86 351 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 EIF1AYO14602 144 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 B4GALT3O60512 393 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 NSA2O95478 260 aaKnown RBP11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PEX11BO96011 259 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 SLC5A2P31639 672 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ACVR1BP36896 505 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 RBPJQ06330 500 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 BCL2L15Q5TBC7 163 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 TMEM53Q6P2H8 277 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 BHLHA9Q7RTU4 235 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ZBTB46Q86UZ6 589 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ZNF565Q8N9K5 539 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 MYLIPQ8WY64 445 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 TMEM41AQ96HV5 264 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 CCDC32Q9BV29 185 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 RAD51DO75771 328 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
PTPRF-205ENST00000414879 OR1Q1Q15612 314 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 PLBD1Q6P4A8 553 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 OR4K13Q8NH42 304 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 SGCDQ92629 289 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 TAMM41Q96BW9 452 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 ADOQ96SZ5 270 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 PITX2Q99697 317 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 ULBP3Q9BZM4 244 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 C6orf106Q9H6K1 298 aaPredicted RBP11.19□□□□□ -0.62
PTPRF-205ENST00000414879 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 NUFIP1Q9UHK0 495 aaKnown RBP11.19□□□□□ -0.62
PTPRF-205ENST00000414879 CA5BQ9Y2D0 317 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 OR51B4Q9Y5P0 310 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 SERINC4A6NH21 518 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 METTL12A8MUP2 240 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 RBBP9O75884 186 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 PTHP01270 115 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 CBLP22681 906 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 MAOBP27338 520 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 ARG2P78540 354 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 TMEM196Q5HYL7 178 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 ENTPD8Q5MY95 495 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 AGBL4Q5VU57 503 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 OR2T11Q8NH01 316 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 PDXPQ96GD0 296 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 WDR77Q9BQA1 342 aaPredicted RBP11.19□□□□□ -0.62
PTPRF-205ENST00000414879 WDR83Q9BRX9 315 aaKnown RBP11.19□□□□□ -0.62
PTPRF-205ENST00000414879 PISDQ9UG56 409 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 SPEF1Q9Y4P9 236 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 IQCMA0A1B0GVH7 501 aa11.19□□□□□ -0.62
PTPRF-205ENST00000414879 OR14I1A6ND48 311 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms