RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 GTPBP1O00178 669 aaKnown RBP22.93■■□□□ 1.26
CPNE1-207ENST00000414664 HMGN4O00479 90 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 FCMRO60667 390 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 TCEA1P23193 301 aaKnown RBP22.93■■□□□ 1.26
CPNE1-207ENST00000414664 NUP107P57740 925 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 ZNF141Q15928 474 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 GPAT3Q53EU6 434 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 RTL6Q6ICC9 239 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 SLC2A7Q6PXP3 512 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 RPRMLQ8N4K4 120 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 SDCCAG3Q96C92 435 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 TMEM120AQ9BXJ8 343 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 MRGBPQ9NV56 204 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 MKLN1Q9UL63 735 aa22.93■■□□□ 1.26
CPNE1-207ENST00000414664 NCOA6Q14686 2063 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-207ENST00000414664 PHF3Q92576 2039 aaKnown RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 HCRTR2O43614 444 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 GMFGO60234 142 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 EPPINO95925 133 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 GLI4P10075 376 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 ZNF41P51814 821 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 ARFIP2P53365 341 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 CD226Q15762 336 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 BCL2A1Q16548 175 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 DCST1Q5T197 706 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 AP1ARQ63HQ0 302 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 OR10Q1Q8NGQ4 319 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 PNPT1Q8TCS8 783 aaKnown RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 ZPLD1Q8TCW7 415 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 SH3YL1Q96HL8 342 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 TRNT1Q96Q11 434 aaKnown RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 SAP130Q9H0E3 1048 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 RAD21L1Q9H4I0 556 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 SLC6A13Q9NSD5 602 aa22.92■■□□□ 1.26
CPNE1-207ENST00000414664 KLF2Q9Y5W3 355 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 USP9YO00507 2555 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-207ENST00000414664 ICE1Q9Y2F5 2266 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 A0A096LPI6 279 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 CLDN14O95500 239 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 PEPDP12955 493 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 CRATP43155 626 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 B3GALT5-AS1P59052 145 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 ACSF3Q4G176 576 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-207ENST00000414664 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.91■■□□□ 1.26
CPNE1-207ENST00000414664 PDZK1Q5T2W1 519 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 CA5BP1Q8WTZ4 195 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 ZBTB8AQ96BR9 441 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 PAIP1Q9H074 479 aaKnown RBP22.91■■□□□ 1.26
CPNE1-207ENST00000414664 THUMPD1Q9NXG2 353 aaKnown RBP22.91■■□□□ 1.26
CPNE1-207ENST00000414664 STOML1Q9UBI4 398 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 RNF6Q9Y252 685 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 VDAC3Q9Y277 283 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 PCDHB14Q9Y5E9 798 aa22.91■■□□□ 1.26
CPNE1-207ENST00000414664 PTPN13Q12923 2485 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 A0A1W2PP18 115 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 SERINC4A6NH21 518 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 H0Y3Z8 333 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 KIAA0513O60268 411 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 EIF4E2O60573 245 aaKnown RBP22.9■■□□□ 1.26
CPNE1-207ENST00000414664 C1QCP02747 245 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 CHRNB4P30926 498 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 STARP49675 285 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 LHX2P50458 406 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 P2RX1P51575 399 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 SUMO3P55854 103 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-207ENST00000414664 SRYQ05066 204 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 COX20Q5RI15 118 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 TYW3Q6IPR3 259 aaKnown RBP22.9■■□□□ 1.26
CPNE1-207ENST00000414664 ARSKQ6UWY0 536 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 LACC1Q8IV20 430 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 ZNF619Q8N2I2 560 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 PMM1Q92871 262 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 ZNF385DQ9H6B1 395 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 SLC52A3Q9NQ40 469 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 CARD8Q9Y2G2 431 aa22.9■■□□□ 1.26
CPNE1-207ENST00000414664 SPTBN1Q01082 2364 aaKnown RBP22.9■■□□□ 1.26
CPNE1-207ENST00000414664 OR2M5A3KFT3 312 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 ZNF264O43296 627 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 UGT2B17O75795 530 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 NR2F1P10589 423 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 UBL4AP11441 157 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 ZNF708P17019 499 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 ZNF17P17021 662 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 POU3F2P20265 443 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-207ENST00000414664 CAPN3P20807 821 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 ADH7P40394 386 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 EEFSECP57772 596 aaKnown RBP22.89■■□□□ 1.25
CPNE1-207ENST00000414664 ZNF117Q03924 483 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 FUT5Q11128 374 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 GTDC1Q4AE62 458 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 LRIF1Q5T3J3 769 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 RIPPLY2Q5TAB7 128 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 NSUN5P2Q63ZY6 315 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 FRRS1Q6ZNA5 592 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 LRRC74BQ6ZQY2 392 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 TSPEARQ8WU66 669 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 TRIB1Q96RU8 372 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 CALHM2Q9HA72 323 aa22.89■■□□□ 1.25
CPNE1-207ENST00000414664 ASH1LQ9NR48 2969 aaKnown RBP22.89■■□□□ 1.25
CPNE1-207ENST00000414664 P2RX2Q9UBL9 471 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms