RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF599Q96NL3 588 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SLC30A2Q9BRI3 323 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 TRAF4Q9BUZ4 470 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 FN3KRPQ9HA64 309 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 EXD2Q9NVH0 621 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 HCN3Q9P1Z3 774 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 RAI2Q9Y5P3 530 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 PTGDR2Q9Y5Y4 395 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 EDDM13A0A1B0GTR0 161 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SNTNA6NMZ2 147 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 J3KTA2 159 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 DSCR3O14972 297 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 NFATC1O95644 943 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 GOT2P00505 430 aaKnown RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MBP02144 154 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 CFIP05156 583 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 LCKP06239 509 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 IFNGR1P15260 489 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 OPRD1P41143 372 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 FOXA1P55317 472 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 RUNX3Q13761 415 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MAD2L1BPQ15013 274 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 USF2Q15853 346 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 XKR7Q5GH72 579 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 C6orf136Q5SQH8 315 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MLIPQ5VWP3 458 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ANKS6Q68DC2 871 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MRNIPQ6NTE8 343 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ENPP6Q6UWR7 440 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 UNQ6494/PRO21346Q6UXR6 183 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 DPY19L3Q6ZPD9 716 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 TICRRQ7Z2Z1 1910 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SLC46A3Q7Z3Q1 461 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 NRARPQ7Z6K4 114 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 DEFB123Q8N688 67 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF248Q8NDW4 579 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 LRRC20Q8TCA0 184 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 HMGB4Q8WW32 186 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SLC7A6Q92536 515 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SUSD6Q92537 303 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MYDGFQ969H8 173 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 TADA1Q96BN2 335 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 OTUB2Q96DC9 234 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 RNFT2Q96EX2 444 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SLC41A3Q96GZ6 507 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 PANX1Q96RD7 426 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SIGLEC11Q96RL6 698 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ACOX2Q99424 681 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 POTEKPQ9BYX7 375 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 EGLN1Q9GZT9 426 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 CDIP1Q9H305 208 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ZDHHC6Q9H6R6 413 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 UBE2ZQ9H832 354 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 C3orf14Q9HBI5 128 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 POPDC3Q9HBV1 291 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 DYRK4Q9NR20 520 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 PNO1Q9NRX1 252 aaKnown RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 PLSCR3Q9NRY6 295 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MYO10Q9HD67 2058 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 A0A087WV48 116 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 MBD3L4A6NDZ8 208 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 MBD3L3A6NE82 208 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 OR51F1A6NGY5 319 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FAM90A7PA6NKC0 464 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FAM90A22PA8MWA6 464 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FAM90A12PA8MX19 464 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FAM90A23PA8MXZ1 464 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TLR4O00206 839 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TLX3O43711 291 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF780AO75290 641 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PRSS56P0CW18 603 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FOSL2P15408 326 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 CD1DP15813 335 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PRKACGP22612 351 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 UCP1P25874 307 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TGFBR1P36897 503 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 LIPAP38571 399 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 MTPNP58546 118 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 HNRNPKP61978 463 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 GLO1Q04760 184 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 HTR4Q13639 388 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TIMM50Q3ZCQ8 353 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF789Q5FWF6 425 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 ARHGAP40Q5TG30 622 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 NXNL2Q5VZ03 156 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TIGD3Q6B0B8 471 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 C22orf39Q6P5X5 142 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FADS6Q8N9I5 356 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 CLEC1AQ8NC01 280 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 MAP6Q96JE9 813 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 OR2A14Q96R47 310 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TRIB3Q96RU7 358 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TRMT61BQ9BVS5 477 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 DCAF13Q9NV06 445 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PKP3Q9Y446 797 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TCF20Q9UGU0 1960 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 LOC285095A0A1B0GVY8 99 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 A0A1W2PPC1 479 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 OR5K3A6NET4 321 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms