RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 SF3B4Q15427 424 aaKnown RBP eCLIP9.12□□□□□ -0.952e-8■■■■■ 37
TMEM248-202ENST00000413593 ZNF630Q2M218 657 aaPredicted RBP9.12□□□□□ -0.95
TMEM248-202ENST00000413593 GLYR1Q49A26 553 aaPredicted RBP9.12□□□□□ -0.95
TMEM248-202ENST00000413593 ATAD3BQ5T9A4 648 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 RAET1LQ5VY80 246 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 AP1ARQ63HQ0 302 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 MYO7BQ6PIF6 2116 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 BLOC1S3Q6QNY0 202 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 ARSKQ6UWY0 536 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 OLIG3Q7RTU3 272 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 C16orf62Q7Z3J2 963 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 MTERF4Q7Z6M4 381 aaKnown RBP9.12□□□□□ -0.95
TMEM248-202ENST00000413593 FUNDC1Q8IVP5 155 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 ZNF527Q8NB42 609 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 RFWD2Q8NHY2 731 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 ZPLD1Q8TCW7 415 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 ZFP90Q8TF47 636 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 CA5BP1Q8WTZ4 195 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 SH3YL1Q96HL8 342 aaPredicted RBP9.12□□□□□ -0.95
TMEM248-202ENST00000413593 ITCHQ96J02 903 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 SIKE1Q9BRV8 207 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 NMUR2Q9GZQ4 415 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 NPHS2Q9NP85 383 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 Q9UFV3 132 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 KCNE5Q9UJ90 142 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 DCTN4Q9UJW0 460 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 MKLN1Q9UL63 735 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 DTNAQ9Y4J8 743 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 NINQ8N4C6 2090 aa9.12□□□□□ -0.95
TMEM248-202ENST00000413593 DNAJC13O75165 2243 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 A0A087WZY1 265 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 CENPVL1A0A0U1RR11 272 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 OR2M5A3KFT3 312 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 PRAMEF27A3QJZ7 478 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 CYSRT1A8MQ03 144 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 FAM47E-STBD1D6RA91 191 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 H0Y3Z8 333 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 H3BNH8 94 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 LINC01387J3KSC0 135 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 OIP5O43482 229 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ATP8B1O43520 1251 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 HCRTR2O43614 444 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 KIAA0513O60268 411 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 TNFRSF21O75509 655 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 KRT75O95678 551 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 GUSBP08236 651 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 RNF144AP50876 292 aaPredicted RBP9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ANXA11P50995 505 aaKnown RBP9.11□□□□□ -0.95
TMEM248-202ENST00000413593 MVDP53602 400 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 GUCY1A3Q02108 690 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ZNF117Q03924 483 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 SRYQ05066 204 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 SQLEQ14534 574 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 GPR68Q15743 365 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ZNF141Q15928 474 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 BCL2A1Q16548 175 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 TMEM44Q2T9K0 475 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 GTDC1Q4AE62 458 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 COX20Q5RI15 118 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 C6orf10Q5SRN2 563 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 PDZK1Q5T2W1 519 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 RIPPLY2Q5TAB7 128 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 NSUN5P2Q63ZY6 315 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 TYW3Q6IPR3 259 aaKnown RBP9.11□□□□□ -0.95
TMEM248-202ENST00000413593 FRRS1Q6ZNA5 592 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ADGRE4PQ86SQ3 457 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 LACC1Q8IV20 430 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ZNF614Q8N883 585 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 OR5M1Q8NGP8 315 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 OR10Q1Q8NGQ4 319 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 LILRB4Q8NHJ6 448 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 B4GALNT2Q8NHY0 566 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 PNPT1Q8TCS8 783 aaKnown RBP9.11□□□□□ -0.95
TMEM248-202ENST00000413593 PHOSPHO1Q8TCT1 267 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 GTF2H4Q92759 462 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ROPN1LQ96C74 230 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 AURKBQ96GD4 344 aaPredicted RBP9.11□□□□□ -0.95
TMEM248-202ENST00000413593 KCNK17Q96T54 332 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 KLHDC3Q9BQ90 382 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 TUBA1CQ9BQE3 449 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 PIGQQ9BRB3 760 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 SAP130Q9H0E3 1048 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ZNF385DQ9H6B1 395 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 CALHM2Q9HA72 323 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 TPT1P8Q9HAU6 139 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 SLC52A3Q9NQ40 469 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 POLE3Q9NRF9 147 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 MED17Q9NVC6 651 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 TMEM45AQ9NWC5 275 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ICAM5Q9UMF0 924 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 VDAC3Q9Y277 283 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 ZNF337Q9Y3M9 751 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 WDR45Q9Y484 360 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 NCKAP5O14513 1909 aa9.11□□□□□ -0.95
TMEM248-202ENST00000413593 GTF3C1Q12789 2109 aa9.1□□□□□ -0.95
TMEM248-202ENST00000413593 NCOA6Q14686 2063 aaPredicted RBP9.1□□□□□ -0.95
TMEM248-202ENST00000413593 A0A0G2JND7 137 aa9.1□□□□□ -0.95
TMEM248-202ENST00000413593 C7orf72A4D263 438 aa9.1□□□□□ -0.95
TMEM248-202ENST00000413593 MBD3L4A6NDZ8 208 aaPredicted RBP9.1□□□□□ -0.95
TMEM248-202ENST00000413593 MBD3L3A6NE82 208 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms