RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HBQ1P09105 142 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 DRD5P21918 477 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 SOX3P41225 446 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 GPR3P46089 330 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 MINDY4Q4G0A6 757 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 KLHL22Q53GT1 634 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 NPSR1Q6W5P4 371 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 MFSD4AQ8N468 514 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 RNF217Q8TC41 542 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 CNOT9Q92600 299 aaKnown RBP22.72■■□□□ 1.23
VRK2-202ENST00000412104 RNFT2Q96EX2 444 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 CD180Q99467 661 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 TEX12Q9BXU0 123 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 DPH1Q9BZG8 443 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 C14orf105Q9NVL8 296 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 LRIT1Q9P2V4 623 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 B3GNT3Q9Y2A9 372 aa22.72■■□□□ 1.23
VRK2-202ENST00000412104 BMP4P12644 408 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 HSD17B7P56937 341 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 RAB40BQ12829 278 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 KCNAB1Q14722 419 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 RNF113BQ8IZP6 322 aaKnown RBP22.71■■□□□ 1.23
VRK2-202ENST00000412104 EVA1AQ9H8M9 152 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 IL20RAQ9UHF4 553 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 ERVK-19Q9WJR5 959 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 USP34Q70CQ2 3546 aa22.71■■□□□ 1.23
VRK2-202ENST00000412104 UNC119BA6NIH7 251 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 METTL15A6NJ78 407 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 H0YIG0 161 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 CD1CP29017 333 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 PGDP52209 483 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 RPS3AP61247 264 aaKnown RBP22.7■■□□□ 1.23
VRK2-202ENST00000412104 GRM7Q14831 915 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 ZNF404Q494X3 552 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 C3orf38Q5JPI3 329 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 OR2T33Q8NG76 320 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 CLDN23Q96B33 292 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 SAMD8Q96LT4 415 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 DACH2Q96NX9 599 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 ZNF559Q9BR84 538 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 C20orf141Q9NUB4 165 aa22.7■■□□□ 1.23
VRK2-202ENST00000412104 IRGMA1A4Y4 181 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 STK25O00506 426 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 DSCR3O14972 297 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 APOL3O95236 402 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 MAKP20794 623 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 ENDOUP21128 410 aaKnown RBP22.7■■□□□ 1.22
VRK2-202ENST00000412104 ETV5P41161 510 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 GCGRP47871 477 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 ETV1P50549 477 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 OR1D5P58170 312 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 C1DQ13901 141 aaKnown RBP22.7■■□□□ 1.22
VRK2-202ENST00000412104 ZNF613Q6PF04 617 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 Q6ZNX1 250 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 RCBTB1Q8NDN9 531 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 DNASE2BQ8WZ79 361 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 AHCYL2Q96HN2 611 aaKnown RBP22.7■■□□□ 1.22
VRK2-202ENST00000412104 FGF20Q9NP95 211 aaPredicted RBP22.7■■□□□ 1.22
VRK2-202ENST00000412104 MED17Q9NVC6 651 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 CCDC59Q9P031 241 aaKnown RBP22.7■■□□□ 1.22
VRK2-202ENST00000412104 CARD8Q9Y2G2 431 aa22.7■■□□□ 1.22
VRK2-202ENST00000412104 KPNA4O00629 521 aaPredicted RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 IFI30P13284 250 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 MTNR1AP48039 350 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 PRKCDQ05655 676 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.69■■□□□ 1.22
VRK2-202ENST00000412104 FUT7Q11130 342 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 HSDL2Q6YN16 418 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 GRAMD2AQ8IUY3 354 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 AMER2Q8N7J2 671 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 C16orf52Q8NHV5 167 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 BRIX1Q8TDN6 353 aaKnown RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 ZNF578Q96N58 590 aaPredicted RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 OR10A5Q9H207 317 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 TMEM27Q9HBJ8 222 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 Q9N2J8 555 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 ATP13A2Q9NQ11 1180 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 SIDT1Q9NXL6 827 aaKnown RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 DNAJB12Q9NXW2 375 aaKnown RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 MAU2Q9Y6X3 613 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 BCAT2O15382 392 aaPredicted RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 GPX5O75715 221 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 IFNA16P05015 189 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 ZGLP1P0C6A0 271 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 ATXN8OSP0DMR3 200 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 ZNF12P17014 697 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 MYL12AP19105 171 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 FUT1P19526 365 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 AFF3P51826 1226 aaKnown RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 CDH11P55287 796 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 MLLT11Q13015 90 aaPredicted RBP22.69■■□□□ 1.22
VRK2-202ENST00000412104 INAQ16352 499 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 NNATQ16517 81 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 FANK1Q8TC84 345 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 GRHL3Q8TE85 626 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 MMP27Q9H306 513 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 OR52D1Q9H346 318 aa22.69■■□□□ 1.22
VRK2-202ENST00000412104 IGHV1OR21-1A0A087WYE8 117 aa22.68■■□□□ 1.22
VRK2-202ENST00000412104 A0A0B4J2E0 115 aa22.68■■□□□ 1.22
VRK2-202ENST00000412104 A0A1B0GX12 115 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms