RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SPHK2Q9NRA0 654 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 KLHL28Q9NXS3 571 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 KLRF1Q9NZS2 232 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 GCNT4Q9P109 453 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 LNPEPQ9UIQ6 1025 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 ZHX2Q9Y6X8 837 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 NOTCH4Q99466 2003 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 STRCQ7RTU9 1775 aa4.32□□□□□ -1.72
LSM5-206ENST00000409987 PPIAL4EA0A075B759 164 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 A0A1W2PNV4 684 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 C9JVG2 144 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 G3V2L1 256 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 NVLO15381 856 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 LINC01565O15544 149 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 SORBS2O94875 1100 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 ANGPTL1O95841 491 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 CSTAP01040 98 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 RPLP0P05388 317 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 PPIAL4FP0DN26 164 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 SELEP16581 610 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 UCP1P25874 307 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 GIFP27352 417 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ATP5C1P36542 298 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 HSD17B2P37059 387 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 C21orf59P57076 290 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 NOP14P78316 857 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 MERTKQ12866 999 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 CELF3Q5SZQ8 465 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 PDZK1Q5T2W1 519 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 OR2A2Q6IF42 318 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 TMEM107Q6UX40 140 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ACOT1Q86TX2 421 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 FAM83FQ8NEG4 500 aaPredicted RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 TRPV1Q8NER1 839 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 OR2T6Q8NHC8 308 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ZNF519Q8TB69 540 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 SLCO2A1Q92959 643 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ADIPOR1Q96A54 375 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 CNRIP1Q96F85 164 aaPredicted RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 NAF1Q96HR8 494 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 ELMO2Q96JJ3 720 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ART5Q96L15 291 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ATP6V1G3Q96LB4 118 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 SYT15Q9BQS2 421 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 SLC30A2Q9BRI3 323 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 TSSK1BQ9BXA7 367 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 LRRN3Q9H3W5 708 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 ALG9Q9H6U8 611 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 GEMIN7Q9H840 131 aaKnown RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 GPN2Q9H9Y4 310 aaPredicted RBP4.31□□□□□ -1.72
LSM5-206ENST00000409987 CYP3A43Q9HB55 503 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 PPIAL4AQ9Y536 164 aa4.31□□□□□ -1.72
LSM5-206ENST00000409987 WRNQ14191 1432 aaPredicted RBP eCLIP4.3□□□□□ -1.72
LSM5-206ENST00000409987 A8MU76 341 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 TCP10L2B9ZVM9 353 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 GOLGA8TH3BQL2 631 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 TOM1O60784 492 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 ZG16O60844 167 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 TOXO94900 526 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 DUS4LO95620 317 aaKnown RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 CRYGCP07315 174 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 CCDC172P0C7W6 258 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 HSMCR30P0CW71 290 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 PRKACAP17612 351 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 PRKACGP22612 351 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 CHMLP26374 656 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 GPR183P32249 361 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 LONP1P36776 959 aaKnown RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 CRYBB1P53674 252 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 RGS8P57771 180 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 CYCSP99999 105 aaKnown RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 EWSR1Q01844 656 aaKnown RBP eCLIP4.3□□□□□ -1.72
LSM5-206ENST00000409987 LIPEQ05469 1076 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 BST2Q10589 180 aaKnown RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 FAM189A2Q15884 450 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 KRT71Q3SY84 523 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 RFTN2Q52LD8 501 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 HIKESHIQ53FT3 197 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 SFT2D3Q587I9 215 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 TCHHL1Q5QJ38 904 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 WLSQ5T9L3 541 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 AGBL2Q5U5Z8 902 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 FAM71F2Q6NXP2 309 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 VITQ6UXI7 678 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 ZNF730Q6ZMV8 503 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 Q71RC1 249 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 GTPBP8Q8N3Z3 284 aaPredicted RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 GVQW1Q8N7I0 195 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 OR9Q2Q8NGE9 314 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 OR5M9Q8NGP3 310 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 OR1F12Q8NHA8 337 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 LILRB4Q8NHJ6 448 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 CAPNS2Q96L46 248 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 CCT8L2Q96SF2 557 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 COPS8Q99627 209 aa4.3□□□□□ -1.72
LSM5-206ENST00000409987 MRPL37Q9BZE1 423 aaKnown RBP4.3□□□□□ -1.72
LSM5-206ENST00000409987 BARHL1Q9BZE3 327 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms