RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 PTGS2P35354 604 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 MAP2K3P46734 347 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 ALDH6A1Q02252 535 aaKnown RBP13.32□□□□□ -0.28
MINDY4-202ENST00000409881 SPHARQ15513 63 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 HKDC1Q2TB90 917 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 KHDRBS2Q5VWX1 349 aaKnown RBP13.32□□□□□ -0.28
MINDY4-202ENST00000409881 NOXRED1Q6NXP6 359 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 PAQR6Q6TCH4 344 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 D2HGDHQ8N465 521 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 CAMKVQ8NCB2 501 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 GALNT6Q8NCL4 622 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 TMEM203Q969S6 136 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 C12orf10Q9HB07 376 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 SSR3Q9UNL2 185 aa13.32□□□□□ -0.28
MINDY4-202ENST00000409881 LSM2Q9Y333 95 aaKnown RBP13.32□□□□□ -0.28
MINDY4-202ENST00000409881 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 PDE9AO76083 593 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 FOLR1P15328 257 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 EVI2BP34910 448 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 GABRA4P48169 554 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 PDX1P52945 283 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 RAB25P57735 213 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 INSM1Q01101 510 aaPredicted RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 DHRS13Q6UX07 377 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 ZCCHC10Q8TBK6 192 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 SLC25A46Q96AG3 418 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 POLR2J2Q9GZM3 115 aaKnown RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 CHRNA10Q9GZZ6 450 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 KLHL31Q9H511 634 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 GALNT9Q9HCQ5 603 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 C12orf4Q9NQ89 552 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 PLEKHB1Q9UF11 243 aaPredicted RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 A0A0G2JN53 185 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 HYKKA2RU49 373 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 LRIT2A6NDA9 550 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 PRAMEF25A6NGN4 478 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 WASHC1A8K0Z3 465 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 TMEM150CB9EJG8 249 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 SEC14L5O43304 696 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 HBQ1P09105 142 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 MSL3P1P0C860 447 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 LAMP1P11279 417 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 SELENOWP63302 87 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 RHAGQ02094 409 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 C22orf42Q6IC83 251 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 ESX1Q8N693 406 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 ZNF655Q8N720 491 aaPredicted RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 OR9Q1Q8NGQ5 310 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 UPRTQ96BW1 309 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 TM4SF19Q96DZ7 209 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 SORBS1Q9BX66 1292 aaKnown RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 NLNQ9BYT8 704 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 B3GNT4Q9C0J1 378 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 B3GNT2Q9NY97 397 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 DNAJC27Q9NZQ0 273 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 EIF3KQ9UBQ5 218 aaKnown RBP13.31□□□□□ -0.28
MINDY4-202ENST00000409881 POLHQ9Y253 713 aa13.31□□□□□ -0.28
MINDY4-202ENST00000409881 SH3D21A4FU49 640 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 RTCAO00442 366 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 ERI3O43414 337 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 PCDH7O60245 1069 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 SRPX2O60687 465 aaPredicted RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 OR7A10O76100 309 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 PDGFAP04085 211 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 MAPK1P28482 360 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 FEN1P39748 380 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 STXBP1P61764 594 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 ZFP36L1Q07352 338 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 ACSM2AQ08AH3 577 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 GANABQ14697 944 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 ACSM2BQ68CK6 577 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 C1orf52Q8N6N3 182 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 AQP11Q8NBQ7 271 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 NT5CQ8TCD5 201 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 ZBED6CLQ96FA7 236 aaPredicted RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 C17orf62Q9BQA9 187 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 SLC6A16Q9GZN6 736 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 AICDAQ9GZX7 198 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 RHCGQ9UBD6 479 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 RUVBL1Q9Y265 456 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 PCNX2A6NKB5 2137 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 SPEGQ15772 3267 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 TEX51A0A1B0GUA7 166 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 FAM227AF5H4B4 570 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 MYL12BO14950 172 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 ZNF250P15622 560 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 MYL12AP19105 171 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 PRPS1L1P21108 318 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 CSRP1P21291 193 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 CAV3P56539 151 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 RAB8AP61006 207 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 MAB21L1Q13394 359 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 TRA2AQ13595 282 aaKnown RBP eCLIP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 DDI2Q5TDH0 399 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms