RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZG16O60844 167 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 NPIPA8P0DM63 369 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 NR2F1P10589 423 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF17P17021 662 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 BMP7P18075 431 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 CAPN3P20807 821 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 CHMP24386 653 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 ADSLP30566 484 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF41P51814 821 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 DSTNP60981 165 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 MAPRE2Q15555 327 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 GTDC1Q4AE62 458 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 KLHL26Q53HC5 615 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 LRIF1Q5T3J3 769 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 C1orf185Q5T7R7 199 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 TYW3Q6IPR3 259 aaKnown RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 B3GNT6Q6ZMB0 384 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 LRRC74BQ6ZQY2 392 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF808Q8N4W9 903 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 B4GALNT2Q8NHY0 566 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 DOCK7Q96N67 2140 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF317Q96PQ6 595 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 TRNT1Q96Q11 434 aaKnown RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 DMRTA2Q96SC8 542 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 TIMP4Q99727 224 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 RTN4RQ9BZR6 473 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 PRDM14Q9GZV8 571 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 PAIP1Q9H074 479 aaKnown RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 COQ3Q9NZJ6 369 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 TNFRSF10DQ9UBN6 386 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 MKLN1Q9UL63 735 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 RPH3AQ9Y2J0 694 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-205ENST00000409810 HRH3Q9Y5N1 445 aa9.9□□□□□ -0.82
CHMP3-205ENST00000409810 SERINC4A6NH21 518 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 EVPLLA8MZ36 301 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 H0Y3Z8 333 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 CLIC1O00299 241 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF264O43296 627 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 GMFGO60234 142 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 ZIC3O60481 467 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 EIF4E2O60573 245 aaKnown RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 TNFRSF21O75509 655 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 UGT2B17O75795 530 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 ZIC2O95409 532 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 H6PDO95479 791 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 NUDT14O95848 222 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 SNRPB2P08579 225 aaKnown RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 UBL4AP11441 157 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 PEPDP12955 493 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 POU3F2P20265 443 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 AGAP20933 346 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 TCEA1P23193 301 aaKnown RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 P2RX1P51575 399 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 CRISP3P54108 245 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 GFRA1P56159 465 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 FUT5Q11128 374 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 CD226Q15762 336 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF141Q15928 474 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 EMC4Q5J8M3 183 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 COX20Q5RI15 118 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 PDZK1Q5T2W1 519 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 CGB2Q6NT52 195 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 XKRXQ6PP77 449 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 C3P1Q6ZMU1 363 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 FRRS1Q6ZNA5 592 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 MRGPRGQ86SM5 289 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 TMCO5AQ8N6Q1 288 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 TOR1AIP2Q8NFQ8 470 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 RND1Q92730 232 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 PMM1Q92871 262 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 ZBTB8AQ96BR9 441 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 AURKBQ96GD4 344 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 SH3YL1Q96HL8 342 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 SAP130Q9H0E3 1048 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 SLC6A13Q9NSD5 602 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 VDAC3Q9Y277 283 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 SLC35A3Q9Y2D2 325 aa9.89□□□□□ -0.83
CHMP3-205ENST00000409810 INTS1Q8N201 2190 aaKnown RBP9.89□□□□□ -0.83
CHMP3-205ENST00000409810 C17orf51A8MQB3 221 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 BBIP1A8MTZ0 92 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 B4DXG7 233 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 SLC22A2O15244 555 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 FCMRO60667 390 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CCDC22O60826 627 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CSTAP01040 98 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 BCHEP06276 602 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ETFAP13804 333 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CPN1P15169 458 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF708P17019 499 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ADH7P40394 386 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 EIF1P41567 113 aaKnown RBP9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CCR4P51679 360 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 EEFSECP57772 596 aaKnown RBP9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ADORA2A-AS1P86434 159 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF117Q03924 483 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 SF3A3Q12874 501 aaKnown RBP eCLIP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms