RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, human

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA1-205	ENST00000409542	SCN2B	O60939	215 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SERPINA1	P01009	418 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CDKN2C	P42773	168 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MAGEA2	P43356	314 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SKP1	P63208	163 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PPP2R2B	Q00005	443 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RBBP5	Q15291	538 aa	Known RBP	11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	C1orf185	Q5T7R7	199 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	OR4F3	Q6IEY1	312 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CAMKMT	Q7Z624	323 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CLEC4F	Q8N1N0	589 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FAM109A	Q8N4B1	249 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RELL2	Q8NC24	303 aa	Predicted RBP	11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	WDR34	Q96EX3	536 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PYURF	Q96I23	114 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RBM4B	Q9BQ04	359 aa	Known RBP	11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RBM4	Q9BWF3	364 aa	Known RBP	11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PRTFDC1	Q9NRG1	225 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ACAD8	Q9UKU7	415 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CBLC	Q9ULV8	474 aa		11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SAMD4A	Q9UPU9	718 aa	Known RBP	11.64	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CCL3	P10147	92 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PCNA	P12004	261 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GPX2	P18283	190 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	UQCRC1	P31930	480 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MAN2A2	P49641	1150 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	WNT3	P56703	355 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ACSM2A	Q08AH3	577 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LRRC74A	Q0VAA2	488 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SLC25A35	Q3KQZ1	300 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SPIN4	Q56A73	249 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RBM48	Q5RL73	367 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	NDUFAF5	Q5TEU4	345 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ACSM2B	Q68CK6	577 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	NXPE4	Q6UWF7	544 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ANKRD46	Q86W74	232 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HIPK1	Q86Z02	1210 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	KRTAP1-3	Q8IUG1	177 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ERI1	Q8IV48	349 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GPALPP1	Q8IXQ4	340 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	OFCC1	Q8IZS5	231 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	NAXE	Q8NCW5	288 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TMIGD2	Q96BF3	282 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	REPS1	Q96D71	796 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MBD6	Q96DN6	1003 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	EGLN2	Q96KS0	407 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CSF3R	Q99062	836 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FAM173A	Q9BQD7	235 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	NPL	Q9BXD5	320 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	REXO4	Q9GZR2	422 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DDX18	Q9NVP1	670 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SIRT5	Q9NXA8	310 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	BTNL2	Q9UIR0	455 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	FN1	P02751	2386 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	NSD1	Q96L73	2696 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	URAD	A6NGE7	173 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SYT5	O00445	386 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GNGT2	O14610	69 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SCAMP2	O15127	329 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SUSD5	O60279	629 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	WDR1	O75083	606 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TRMU	O75648	421 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	LRAT	O95237	230 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ATE1	O95260	518 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	CLIC3	O95833	236 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TBX6	O95947	436 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GSN	P06396	782 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RFPL3S	P0C7P2	107 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	COX7A2	P14406	83 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PPIB	P23284	216 aa	Known RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HPCAL1	P37235	193 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PIGA	P37287	484 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RAB38	P57729	211 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SLC13A2	Q13183	592 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SLC10A1	Q14973	349 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	HYAL4	Q2M3T9	481 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RFX4	Q33E94	735 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	RIPPLY2	Q5TAB7	128 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ANXA8L1	Q5VT79	327 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	POMZP3	Q6PJE2	187 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ZNF773	Q6PK81	442 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	PAMR1	Q6UXH9	720 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	SLCO4C1	Q6ZQN7	724 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ZNF551	Q7Z340	670 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	THAP5	Q7Z6K1	395 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TMPRSS11B	Q86T26	416 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	C10orf111	Q8N326	155 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TBC1D19	Q8N5T2	526 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	ZNF555	Q8NEP9	628 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	OR7G3	Q8NG95	312 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	OR7A2P	Q8NGA2	310 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	DTNBP1	Q96EV8	351 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	QRFPR	Q96P65	431 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	MBOAT4	Q96T53	435 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	TUBA1C	Q9BQE3	449 aa		11.63	□□□□□ -0.55
CHRNA1-205	ENST00000409542	EBPL	Q9BY08	206 aa		11.63	□□□□□ -0.55

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