RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 BTBD1Q9H0C5 482 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 SYNPO2LQ9H987 977 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 HLA-DQA2P01906 255 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 CSF3P09919 207 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 EPHA5P54756 1037 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 SNRPGP62308 76 aaKnown RBP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 GPR18Q14330 331 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 METRNLQ641Q3 311 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 SLC38A6Q8IZM9 456 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 AVL9Q8NBF6 648 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 TM9SF4Q92544 642 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 OTUB2Q96DC9 234 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 OR2B2Q9GZK3 357 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 OR8D2Q9GZM6 311 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 SLC6A20Q9NP91 592 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 NDUFB11Q9NX14 153 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 RPS6KB2Q9UBS0 482 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 ICKQ9UPZ9 632 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 DNAJC13O75165 2243 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 PRSS38A1L453 326 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 MAGEB1P43366 347 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 KHKP50053 298 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 FABP5Q01469 135 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 AGERQ15109 404 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 P2RY14Q15391 338 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 CEP78Q5JTW2 689 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 LCN1P1Q5VSP4 162 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 NKAIN2Q5VXU1 208 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 LCTLQ6UWM7 567 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 OR4K13Q8NH42 304 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 LILRB4Q8NHJ6 448 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 SETD7Q8WTS6 366 aaKnown RBP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 TGM7Q96PF1 710 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 DDX31Q9H8H2 851 aaKnown RBP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 MYEF2Q9P2K5 600 aaKnown RBP12.5□□□□□ -0.41
COL6A2-204ENST00000409416 GRIP1Q9Y3R0 1128 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 COLEC10Q9Y6Z7 277 aa12.5□□□□□ -0.41
COL6A2-204ENST00000409416 A0A075B6Q4 140 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 C2orf72A6NCS6 295 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SNTNA6NMZ2 147 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 HNRNPCL2B2RXH8 293 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 AHCYP23526 432 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ATP5A1P25705 553 aaKnown RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ACADLP28330 430 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 NTSR1P30989 418 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 FBXW4P57775 412 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 TMPRSS9Q7Z410 1059 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 NRSN1Q8IZ57 195 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 OR4N2Q8NGD1 307 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 PFN4Q8NHR9 129 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 RASSF5Q8WWW0 418 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 RSC1A1Q92681 617 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SLC25A36Q96CQ1 311 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 FBXL4Q9UKA2 621 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ZNF346Q9UL40 294 aaKnown RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ROS1P08922 2347 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 MEN1O00255 615 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 LILRB5O75023 590 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 CEACAM5P06731 702 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SOX2P48431 317 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 GPR50Q13585 617 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 KCNAB1Q14722 419 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 C12orf73Q69YU5 71 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SLC36A4Q6YBV0 504 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 PIGXQ8TBF5 258 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 KCND3Q9UK17 655 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 AP1M2Q9Y6Q5 423 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 A0A087WUU8 490 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 H7C1C5 153 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 B3GALT2O43825 422 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 PAPLNO95428 1278 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 FGF19O95750 216 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 PLGP00747 810 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 PSMB10P40306 273 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 LCN6P62502 163 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 DMRTC1Q5HYR2 192 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ENTPD8Q5MY95 495 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 FIGLAQ6QHK4 219 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 SDR16C5Q8N3Y7 309 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 OR13H1Q8NG92 308 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 OR7G2Q8NG99 324 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 CREB3L4Q8TEY5 395 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 ZMYND19Q96E35 227 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-204ENST00000409416 FAM83CQ9BQN1 747 aa12.49□□□□□ -0.41
COL6A2-204ENST00000409416 KATNB1Q9BVA0 655 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms