RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 GAS1P54826 345 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 PSPHP78330 225 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 HOXC5Q00444 222 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 VEZF1Q14119 521 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF141Q15928 474 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 INTS11Q5TA45 600 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 CBLN3Q6UW01 205 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 PCSK4Q6UW60 755 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 VTCN1Q7Z7D3 282 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 KRT73Q86Y46 540 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 GPALPP1Q8IXQ4 340 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 TMCO5AQ8N6Q1 288 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF527Q8NB42 609 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 GPR32P1Q8NGA4 272 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 TM9SF4Q92544 642 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF607Q96SK3 696 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 POLE3Q9NRF9 147 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 MED11Q9P086 117 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 SNX13Q9Y5W8 968 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 ALG1L2C9J202 215 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 GTPBP1O00178 669 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 PEX1O43933 1283 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 NME2P1O60361 137 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 CDC40O60508 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 CSTAP01040 98 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 DBIP07108 87 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 ETS2P15036 469 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 NME2P22392 152 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 RYKP34925 604 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 MEOX1P50221 254 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 KCNJ10P78508 379 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 RHDQ02161 417 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 TRIM25Q14258 630 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 FGFBP1Q14512 234 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 CYBRD1Q53TN4 286 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 ENPP6Q6UWR7 440 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 DND1Q8IYX4 353 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 ARHGAP24Q8N264 748 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 METTL25Q8N6Q8 603 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 VANGL1Q8TAA9 524 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 GNRHR2Q96P88 292 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 ANGPTL4Q9BY76 406 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 SUCOQ9UBS9 1254 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 FBXL2Q9UKC9 423 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 POMPQ9Y244 141 aa12.88□□□□□ -0.35
CHRNA1-204ENST00000409323 FAM166BA8MTA8 275 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 M0R3H8 397 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 HCRTR2O43614 444 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 ADAM11O75078 769 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 GMNNO75496 209 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 SERPINB7O75635 380 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 PDE9AO76083 593 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 NID1P14543 1247 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 CD247P20963 164 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 CNR1P21554 472 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 OR1E2P47887 323 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 EEF1A1P68104 462 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 RPP38P78345 283 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF117Q03924 483 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 FOXD4Q12950 439 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 BNIP2Q12982 314 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF169Q14929 603 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 LARS2Q15031 903 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 LIN52Q52LA3 116 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 FNDC7Q5VTL7 733 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 PATL1Q86TB9 770 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 DHFR2Q86XF0 187 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 LACC1Q8IV20 430 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 SLC30A8Q8IWU4 369 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 WDSUB1Q8N9V3 476 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 BHLHE22Q8NFJ8 381 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 RELTQ969Z4 430 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 ASB9Q96DX5 294 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 SCMH1Q96GD3 660 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 NSMCE2Q96MF7 247 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 HOXD1Q9GZZ0 328 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 TSPAN10Q9H1Z9 355 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 CNIH4Q9P003 139 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 ABCG2Q9UNQ0 655 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 NTNG1Q9Y2I2 539 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 MED12Q93074 2177 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms