RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ROGDIQ9GZN7 287 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 PPA2Q9H2U2 334 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 RPF2Q9H7B2 306 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 CRLF2Q9HC73 371 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 SEMA4BQ9NPR2 832 aaPredicted RBP8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 MYOTQ9UBF9 498 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ZNF221Q9UK13 617 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ZNF835Q9Y2P0 537 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 ASB4Q9Y574 426 aa8.92□□□□□ -0.98
NIF3L1-202ENST00000409020 LOC390937A0A1W2PQ73 354 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 PROM1O43490 865 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 GMDSO60547 372 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CLDN9O95484 217 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 AIFM1O95831 613 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CLPSP04118 112 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TNNI3P19429 210 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 NCF2P19878 526 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 RAB3AP20336 220 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 GNALP38405 381 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CASP3P42574 277 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CDH13P55290 713 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 IGLV3-21P80748 117 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 RIN1Q13671 783 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 COTL1Q14019 142 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 YIF1BQ5BJH7 314 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SGO1Q5FBB7 561 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MRM1Q6IN84 353 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TDRPQ86YL5 185 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SPPL2CQ8IUH8 684 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MMP21Q8N119 569 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 ZCCHC7Q8N3Z6 543 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MORN4Q8NDC4 146 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 PIK3C3Q8NEB9 887 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SRFBP1Q8NEF9 429 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 OR52N2Q8NGI0 321 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 OR14A16Q8NHC5 309 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 AKAP1Q92667 903 aaKnown RBP eCLIP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM125Q96AQ2 219 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 HBEGFQ99075 208 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM246Q9BRR3 403 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 IFT46Q9NQC8 304 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 RPRD1BQ9NQG5 326 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TEX10Q9NXF1 929 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 B3GNT2Q9NY97 397 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TRPS1Q9UHF7 1281 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 ZNF225Q9UK10 706 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 RPS6KA6Q9UK32 745 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CNOT11Q9UKZ1 510 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MRPS7Q9Y2R9 242 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 YARS2Q9Y2Z4 477 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 HRH3Q9Y5N1 445 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CREBBPQ92793 2442 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 HRNRQ86YZ3 2850 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CACNA1DQ01668 2161 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TEP1Q99973 2627 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 A0A087WXM4 84 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 EXOC1LA0A1B0GW35 172 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 A8MT66 165 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CENPXA8MT69 81 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 FAM166BA8MTA8 275 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 ADAM10O14672 748 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 PGRMC2O15173 223 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 RIPK2O43353 540 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 EDF1O60869 148 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 NOL3O60936 208 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CLPXO76031 633 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 PDE9AO76083 593 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 H6PDO95479 791 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 IGKV3-11P04433 115 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 CCNA2P20248 432 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 HPCAL1P37235 193 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SERPINB9P50453 376 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 PER3P56645 1201 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MFSD13AQ14CX5 517 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SPATS1Q496A3 300 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 AARDQ4LEZ3 155 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 RSBN1Q5VWQ0 802 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 XKRXQ6PP77 449 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 PLEKHM3Q6ZWE6 761 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 UTS2BQ765I0 119 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MRGPRGQ86SM5 289 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DPP10Q8N608 796 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 OR4F6Q8NGB9 312 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 FBXO30Q8TB52 745 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 STON2Q8WXE9 905 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 ASB15Q8WXK1 588 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DAZLQ92904 295 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TESCQ96BS2 214 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SENP5Q96HI0 755 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 MAGED4Q96JG8 741 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DGAT2Q96PD7 388 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 C1orf21Q9H246 121 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DDX31Q9H8H2 851 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TMEM216Q9P0N5 145 aa8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 TNPO3Q9Y5L0 923 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-202ENST00000409020 DMRT1Q9Y5R6 373 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms