RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CLUP10909 449 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CHRNB1P11230 501 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ELK1P19419 428 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CELP19835 753 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 NOS3P29474 1203 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CTBP2P56545 445 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 PPP3R1P63098 170 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 GNA13Q14344 377 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 TCEA2Q15560 299 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 LAMTOR1Q6IAA8 161 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 SSX6Q7RTT6 188 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ARHGEF39Q8N4T4 335 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 LILRB4Q8NHJ6 448 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 OR1E3Q8WZA6 343 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 FGF14Q92915 247 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 SLC17A9Q9BYT1 436 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 DPH1Q9BZG8 443 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ASB6Q9NWX5 421 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CPAMD8Q8IZJ3 1885 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 COL5A1P20908 1838 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 LOC105369274A0A096LPK9 316 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 NPIPA5A0A0B4J1W7 369 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 LOC102723532A0A0G2JNH3 316 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 PRSS38A1L453 326 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 NPIPA7E9PJI5 369 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 TNFSF14O43557 240 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 HCRTR1O43613 425 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 HYAL3O43820 417 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 IDH3BO43837 385 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ADH1BP00325 375 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 NPIPA8P0DM63 369 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 MYL9P24844 172 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 HLA-DMAP28067 261 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 TFF2Q03403 129 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 FAM214AQ32MH5 1076 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 PSRC1Q6PGN9 363 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 SFTPA2Q8IWL1 248 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 OR4N4Q8N0Y3 316 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 C17orf47Q8NEP4 570 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 OR4E2Q8NGC2 313 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 OR4M1Q8NGD0 313 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 NR4A3Q92570 626 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ARMC5Q96C12 935 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 AHCYL2Q96HN2 611 aaKnown RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 SECISBP2Q96T21 854 aaKnown RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 TBC1D17Q9HA65 648 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 TRPV5Q9NQA5 729 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 PHPT1Q9NRX4 125 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 POLHQ9Y253 713 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ALG5Q9Y673 324 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 THADAQ6YHU6 1953 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 ANKRD34BA5PLL1 514 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 SGK494L7N484 410 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 GTPBP1O00178 669 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 CTSBP07858 339 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 GALP22466 123 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 NDUFS1P28331 727 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CLDN20P56880 219 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 OR10A3P58181 314 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 RPS21P63220 83 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 ZNF85Q03923 595 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 RUNX1T1Q06455 604 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PYDC2Q56P42 97 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 TMEM196Q5HYL7 178 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 MARCH9Q86YJ5 346 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 LRRC25Q8N386 305 aaPredicted RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 Q8N402 240 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 NEIL3Q8TAT5 605 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PEX11GQ96HA9 241 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 SLC38A2Q96QD8 506 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 OR52D1Q9H346 318 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 ACOXLQ9NUZ1 547 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 LYARQ9NX58 379 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 DAPP1Q9UN19 280 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CLCA2Q9UQC9 943 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 GPSM3Q9Y4H4 160 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 MAU2Q9Y6X3 613 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 A0A0X1KG70 313 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 IRGMA1A4Y4 181 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 TMCC2O75069 709 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 EIF4EP06730 217 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 THBS1P07996 1170 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 MAT2AP31153 395 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 GCGRP47871 477 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 SIM1P81133 766 aaPredicted RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 E2F1Q01094 437 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 GALK2Q01415 458 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CLPPQ16740 277 aaPredicted RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 TATDN3Q17R31 274 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 ZFP69Q49AA0 526 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PLBD1Q6P4A8 553 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PLEKHM3Q6ZWE6 761 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PXKQ7Z7A4 578 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 AMIGO1Q86WK6 493 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 TCTE3Q8IZS6 198 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 OR4M2Q8NGB6 313 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 MARVELD1Q9BSK0 173 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms