RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 RIDAP52758 137 aaKnown RBP13.16□□□□□ -0.3
DUSP28-202ENST00000405954 PRKAG1P54619 331 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 ARF5P84085 180 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 PRKCZQ05513 592 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 RAB40BQ12829 278 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 MPPE1Q53F39 396 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 NAXDQ8IW45 347 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 DNAJB3Q8WWF6 145 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 RAB3CQ96E17 227 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 ZDHHC4Q9NPG8 344 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 HIST1H2ABP04908 130 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
DUSP28-202ENST00000405954 IFNGR1P15260 489 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
DUSP28-202ENST00000405954 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
DUSP28-202ENST00000405954 PTGER3P43115 390 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 GZMMP51124 257 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 ZNF660Q6AZW8 331 aaPredicted RBP13.16□□□□□ -0.3
DUSP28-202ENST00000405954 UBE2R2Q712K3 238 aaPredicted RBP13.16□□□□□ -0.3
DUSP28-202ENST00000405954 HIST3H2AQ7L7L0 130 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 POGLUT1Q8NBL1 392 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 XAGE5Q8WWM1 108 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 HIST1H2ACQ93077 130 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 CRTAC1Q9NQ79 661 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 TRIM36Q9NQ86 728 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 FTSJ1Q9UET6 329 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
DUSP28-202ENST00000405954 CCDC88CQ9P219 2028 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ZNF729A6NN14 1252 aaPredicted RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 FLRT2O43155 660 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ACP2P11117 423 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 BDKRB2P30411 391 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 NPBWR1P48145 328 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 PTH2RP49190 550 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ILKQ13418 452 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ZBTB6Q15916 424 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 OR1J4Q8NGS1 313 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 TMEM41AQ96HV5 264 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SMOQ99835 787 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 TM6SF2Q9BZW4 377 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 RUVBL1Q9Y265 456 aaKnown RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ANKRD61A6NGH8 418 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 PRKRAO75569 313 aaKnown RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 THP07101 528 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 NDUFB7P17568 137 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ACVRL1P37023 503 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 AQP2P41181 271 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 LILRA4P59901 499 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ARHGAP1Q07960 439 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 B3GNTL1Q67FW5 361 aaPredicted RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 OR52W1Q6IF63 320 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 CEACAM20Q6UY09 585 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 KRT77Q7Z794 578 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ST7LQ8TDW4 575 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 DUSP19Q8WTR2 217 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SEC22AQ96IW7 307 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ZNF75AQ96N20 296 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SLITRK2Q9H156 845 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ING1Q9UK53 422 aaPredicted RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 WASF3Q9UPY6 502 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 NOP16Q9Y3C1 178 aaKnown RBP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SIP14410 1827 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 FAM183AA6NL82 134 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 DVL2O14641 736 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 CSN2P05814 226 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 HSD3B1P14060 373 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SDHAP31040 664 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 RAB5CP51148 216 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 CCR8P51685 355 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 CEBPGP53567 150 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 TIAL1Q01085 375 aaKnown RBP eCLIP13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ALG11Q2TAA5 492 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 FAM69AQ5T7M9 428 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 PRAMEF17Q5VTA0 474 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ZNF615Q8N8J6 731 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ZNF383Q8NA42 475 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 POM121Q96HA1 1249 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 EGLN3Q9H6Z9 239 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
DUSP28-202ENST00000405954 ADH1CP00326 375 aa13.14□□□□□ -0.31
DUSP28-202ENST00000405954 HPP00738 406 aa13.14□□□□□ -0.31
DUSP28-202ENST00000405954 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms