RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ISG20L2Q9H9L3 353 aaKnown RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 SIDT1Q9NXL6 827 aaKnown RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 IL20RAQ9UHF4 553 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 PLEKHM1Q9Y4G2 1056 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 GPSM3Q9Y4H4 160 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 DAPL1A0PJW8 107 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 FAM86C2PA6NEL3 165 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 SLC22A31A6NKX4 558 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 PLPP2O43688 288 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF780AO75290 641 aaPredicted RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 RCBTB2O95199 551 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 KAT7O95251 611 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 SLC6A1P30531 599 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 RPS21P63220 83 aaKnown RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 GALK2Q01415 458 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 SUZ12Q15022 739 aaKnown RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 ASPGQ86U10 573 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 GLCCI1Q86VQ1 547 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 OR5W2Q8NH69 310 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 FANK1Q8TC84 345 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 SDF2Q99470 211 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 NDC1Q9BTX1 674 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 HDHD2Q9H0R4 259 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 PIGUQ9H490 435 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 C6orf106Q9H6K1 298 aaPredicted RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 SYNPO2LQ9H987 977 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 MOSPD1Q9UJG1 213 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF223Q9UK11 482 aaPredicted RBP9.99□□□□□ -0.81
CLIP4-204ENST00000404424 STON1Q9Y6Q2 735 aa9.99□□□□□ -0.81
CLIP4-204ENST00000404424 LOC102723532A0A0G2JNH3 316 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 A0A1W2PP55 124 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 FAM183AA6NL82 134 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 FMO6PO60774 539 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 MT-ND5P03915 603 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 DBIP07108 87 aaKnown RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 RPS4Y1P22090 263 aaKnown RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 NDUFS1P28331 727 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 TLX1P31314 330 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ACSL1P33121 698 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 MRPL28Q13084 256 aaKnown RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 VITQ6UXI7 678 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 VN1R4Q7Z5H5 301 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ABI3BPQ7Z7G0 1075 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 OAFQ86UD1 273 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 AMIGO1Q86WK6 493 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CACUL1Q86Y37 369 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CDK20Q8IZL9 346 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF619Q8N2I2 560 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 OR7G1Q8NGA0 311 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 TMEM239Q8WW34 195 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 COL26A1Q96A83 441 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 RFT1Q96AA3 541 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 PAWRQ96IZ0 340 aaKnown RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 TIMP4Q99727 224 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 WACQ9BTA9 647 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 DPH1Q9BZG8 443 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF350Q9GZX5 532 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CMC2Q9NRP2 79 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CXXC1Q9P0U4 656 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SERGEFQ9UGK8 458 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 TMEM5Q9Y2B1 443 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 C5orf67F2Z3F1 127 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CPNE3O75131 537 aaKnown RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SLC35G6P0C7Q6 338 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF888P0CJ79 500 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CHRNB1P11230 501 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 HK1P19367 917 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 NPR2P20594 1047 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 GJA4P35212 333 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 PITPNBP48739 271 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 VEGFBP49765 207 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 FXYD6P3P58550 94 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ENPP2Q13822 863 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 GPR176Q14439 515 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 DUSP5Q16690 384 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 USP53Q70EK8 1073 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 CREB3L2Q70SY1 520 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF767PQ75MW2 155 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 NR2C2APQ86WQ0 139 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 KCT2Q8NC54 265 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 C17orf50Q8WW18 174 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 NACC2Q96BF6 587 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SLC22A18Q96BI1 424 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SCARF2Q96GP6 870 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SERINC2Q96SA4 455 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 THAP7Q9BT49 309 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 C1QTNF7Q9BXJ2 289 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 ENAMQ9NRM1 1142 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 MCUBQ9NWR8 336 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SATB2Q9UPW6 733 aa9.98□□□□□ -0.81
CLIP4-204ENST00000404424 SIRT4Q9Y6E7 314 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 MDC1Q14676 2089 aaKnown RBP9.98□□□□□ -0.81
CLIP4-204ENST00000404424 A0A0G2JMP0 313 aa9.97□□□□□ -0.81
CLIP4-204ENST00000404424 A0A0X1KG70 313 aa9.97□□□□□ -0.81
CLIP4-204ENST00000404424 URADA6NGE7 173 aa9.97□□□□□ -0.81
CLIP4-204ENST00000404424 PRR23D1E9PI22 279 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms