RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 DPY30Q9C005 99 aa12□□□□□ -0.49
SDF4-203ENST00000403997 PNPOQ9NVS9 261 aa12□□□□□ -0.49
SDF4-203ENST00000403997 GPATCH2Q9NW75 528 aa12□□□□□ -0.49
SDF4-203ENST00000403997 PCDHGB4Q9UN71 923 aa12□□□□□ -0.49
SDF4-203ENST00000403997 AP4B1Q9Y6B7 739 aa12□□□□□ -0.49
SDF4-203ENST00000403997 KCNE3Q9Y6H6 103 aa12□□□□□ -0.49
SDF4-203ENST00000403997 A0A087WZY1 265 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 A0A1W2PNV4 684 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 A0A1W2PQD3 144 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 A6NNC1 897 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 SMNDC1O75940 238 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■□□ 17.2
SDF4-203ENST00000403997 CRHP06850 196 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 EPXP11678 715 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 LBPP18428 481 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 ZNF41P51814 821 aaPredicted RBP11.99□□□□□ -0.49
SDF4-203ENST00000403997 SORDQ00796 357 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 BST1Q10588 318 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 TMEM44Q2T9K0 475 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 DCST2Q5T1A1 773 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 FBXW10Q5XX13 1052 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 CLECL1Q8IZS7 167 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 CNEP1R1Q8N9A8 125 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 B4GALNT2Q8NHY0 566 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 PHOSPHO1Q8TCT1 267 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 ACTRT2Q8TDY3 377 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 OR7D2Q96RA2 312 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 HOXD1Q9GZZ0 328 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 RASSF1Q9NS23 344 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 MED17Q9NVC6 651 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 GALNT8Q9NY28 637 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 HAO1Q9UJM8 370 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 PACSIN3Q9UKS6 424 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 AKAP6Q13023 2319 aa11.99□□□□□ -0.49
SDF4-203ENST00000403997 ANKHD1Q8IWZ3 2542 aaKnown RBP11.99□□□□□ -0.49
SDF4-203ENST00000403997 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 NPIPA5A0A0B4J1W7 369 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 TMEM120BA0PK00 339 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 A8MXE2 369 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 NPIPA7E9PJI5 369 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 H3BNH8 94 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 GTPBP1O00178 669 aaKnown RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 RNASET2O00584 256 aaKnown RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 EIF1AYO14602 144 aaKnown RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 TNFSF13O75888 250 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 OPN1LWP04000 364 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 NPIPA8P0DM63 369 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 ZNF17P17021 662 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 MATN1P21941 496 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 ATP12AP54707 1039 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 PON3Q15166 354 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 CD226Q15762 336 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 PLPPR5Q32ZL2 321 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 KLHL26Q53HC5 615 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 PPP4R4Q6NUP7 873 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 C6orf120Q7Z4R8 191 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 BTLAQ7Z6A9 289 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 MTERF4Q7Z6M4 381 aaKnown RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 WDR75Q8IWA0 830 aaKnown RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 CLEC4FQ8N1N0 589 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 GTPBP8Q8N3Z3 284 aaPredicted RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 ZNF527Q8NB42 609 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 OR5D16Q8NGK9 328 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 OR4A15Q8NGL6 344 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 FNDC9Q8TBE3 224 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 MGARPQ8TDB4 240 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 ZBTB8AQ96BR9 441 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 ZNF845Q96IR2 970 aaPredicted RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 NPAS1Q99742 590 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 PRRG4Q9BZD6 226 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 CLEC4MQ9H2X3 399 aaPredicted RBP11.98□□□□□ -0.49
SDF4-203ENST00000403997 ZNF175Q9Y473 711 aa11.98□□□□□ -0.49
SDF4-203ENST00000403997 RNF103-CHMP3A0A140T963 221 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 FAM221AA4D161 298 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 DUXAA6NLW8 204 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 MSTNO14793 375 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 ERLIN1O75477 346 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 CPSF4O95639 269 aaKnown RBP11.97□□□□□ -0.49
SDF4-203ENST00000403997 NUDT14O95848 222 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 DNAJA1P31689 397 aaKnown RBP11.97□□□□□ -0.49
SDF4-203ENST00000403997 CPOXP36551 454 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 KIR2DL2P43627 348 aaPredicted RBP11.97□□□□□ -0.49
SDF4-203ENST00000403997 EIF1AXP47813 144 aaKnown RBP11.97□□□□□ -0.49
SDF4-203ENST00000403997 RNF144AP50876 292 aaPredicted RBP11.97□□□□□ -0.49
SDF4-203ENST00000403997 RPS26P62854 115 aaKnown RBP11.97□□□□□ -0.49
SDF4-203ENST00000403997 RAC1P63000 192 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 SIRPAP78324 504 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 ANXA8L1Q5VT79 327 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 VWA1Q6PCB0 445 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 GGNQ86UU5 652 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 ANKRD46Q86W74 232 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 METTL25Q8N6Q8 603 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 ZNF614Q8N883 585 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 VPS37AQ8NEZ2 397 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 OR8J2Q8NGG1 315 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 STARD4Q96DR4 205 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 RNF145Q96MT1 663 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 SDF2Q99470 211 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms