RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 MEOX1P50221 254 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 KLRB1Q12918 225 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 TBCELQ5QJ74 424 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 CBLN3Q6UW01 205 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 MICU2Q8IYU8 434 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 ZFP62Q8NB50 900 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 PMM1Q92871 262 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 KCTD14Q9BQ13 255 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 SUCOQ9UBS9 1254 aaKnown RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 EGFL7Q9UHF1 273 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 GTF3C1Q12789 2109 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 SERINC4A6NH21 518 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 LRRC3CA6NJW4 275 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 GNB5O14775 395 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 OIP5O43482 229 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 MFN2O95140 757 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 HSD17B1P14061 328 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 IL7RP16871 459 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 KCNJ10P78508 379 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 GABPB1Q06547 395 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 DMTNQ08495 405 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 NDUFAF6Q330K2 333 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 SAMD4BQ5PRF9 694 aaKnown RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 RPUSD3Q6P087 351 aaKnown RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 ERICH5Q6P6B1 374 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 BNC2Q6ZN30 1099 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 PACS2Q86VP3 889 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF527Q8NB42 609 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 OR52P1PQ8NH57 321 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 BBS10Q8TAM1 723 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 JSRP1Q96MG2 331 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-204ENST00000401473 THTPAQ9BU02 230 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 PCDHAC1Q9H158 963 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 GSC2O15499 205 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 TPST1O60507 370 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 ATP5HO75947 161 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 RASAL1O95294 804 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 NCK1P16333 377 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 HTR1EP28566 365 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 ADH7P40394 386 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 C17orf67Q0P5P2 114 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 FGFBP1Q14512 234 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 DUSP7Q16829 419 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 GLIPR1L2Q4G1C9 344 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 TIGD3Q6B0B8 471 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 CCDC80Q76M96 950 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 COMTD1Q86VU5 262 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 PEX5LQ8IYB4 626 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 CLIP4Q8N3C7 705 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 PHOSPHO1Q8TCT1 267 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 ARSGQ96EG1 525 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 TMEM41AQ96HV5 264 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 CADM1Q9BY67 442 aaKnown RBP14.54□□□□□ -0.08
HMGA1-204ENST00000401473 MED11Q9P086 117 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 FBXL2Q9UKC9 423 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 ANGPT4Q9Y264 503 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 NTNG1Q9Y2I2 539 aa14.54□□□□□ -0.08
HMGA1-204ENST00000401473 TMEM229AB2RXF0 380 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 GMFGO60234 142 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 ADAM11O75078 769 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 EPPINO95925 133 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 OPN1SWP03999 348 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 DBIP07108 87 aaKnown RBP14.53□□□□□ -0.08
HMGA1-204ENST00000401473 PABPC4LP0CB38 370 aaKnown RBP14.53□□□□□ -0.08
HMGA1-204ENST00000401473 NID1P14543 1247 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 KDELR2P33947 212 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 PGM1P36871 562 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 NCALDP61601 193 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 FXNQ16595 210 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 CCDC121Q6ZUS5 278 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF843Q8N446 348 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 SMYD1Q8NB12 490 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 TAMM41Q96BW9 452 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF524Q96C55 264 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 TTTY12Q9BZ98 90 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 ZFP64Q9NPA5 681 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 CARD8Q9Y2G2 431 aa14.53□□□□□ -0.08
HMGA1-204ENST00000401473 SNPHO15079 494 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 DNAJA2O60884 412 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 PDE5AO76074 875 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 GLSO94925 669 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 CLK3P49761 638 aaKnown RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 EEF1A1P68104 462 aaKnown RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 MS4A2Q01362 244 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF311Q5JNZ3 666 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 MRPL2Q5T653 305 aaKnown RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 CISD2Q8N5K1 135 aaKnown RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 OR1J4Q8NGS1 313 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 FIG4Q92562 907 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 CNOT9Q92600 299 aaKnown RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 SH3YL1Q96HL8 342 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF607Q96SK3 696 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 WFDC6Q9BQY6 131 aa14.52□□□□□ -0.08
HMGA1-204ENST00000401473 PRPF19Q9UMS4 504 aaKnown RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF443Q9Y2A4 671 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-204ENST00000401473 CDHR4A6H8M9 788 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 CXCR6O00574 342 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 CSTAP01040 98 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 THBS1P07996 1170 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms