RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 GPR50Q13585 617 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 PPP1R26Q5T8A7 1209 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 C9orf131Q5VYM1 1079 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OR10A2Q9H208 303 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 PIM2Q9P1W9 311 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DISP3Q9P2K9 1392 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF90Q03938 601 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 NTRK3Q16288 839 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF239Q16600 458 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ACOT6Q3I5F7 207 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 GPR174Q9BXC1 333 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FBXO34Q9NWN3 711 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 EEF1DP3Q658K8 133 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DHRS13Q6UX07 377 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 BOLLQ8N9W6 283 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 PYURFQ96I23 114 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SLCO1B1Q9Y6L6 691 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ABCC2Q92887 1545 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 COL17A1Q9UMD9 1497 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ADGRF5Q8IZF2 1346 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MRPS14O60783 128 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 RPS12P25398 132 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 BEX3Q00994 111 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MEX3BQ6ZN04 569 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FADS6Q8N9I5 356 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 KCNA7Q96RP8 456 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 HCAR1Q9BXC0 346 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OR51I1Q9H343 314 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OR1A1Q9P1Q5 309 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DENRO43583 198 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 HPRP00739 348 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SYPP08247 313 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 KDELR1P24390 212 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 TECPR1Q7Z6L1 1165 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM213BQ8TBF2 198 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 CACNG2Q9Y698 323 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MED13Q9UHV7 2174 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC25A5P05141 298 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FGF4P08620 206 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 CD1CP29017 333 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 POU3F4P49335 361 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ERVK-21P61565 698 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SHFQ7M4L6 423 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 GPC2Q8N158 579 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OR4F15Q8NGB8 312 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OR6N2Q8NGY6 317 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2T4Q8NH00 348 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 BORCS6Q96GS4 357 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DERAQ9Y315 318 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 KLHL33A6NCF5 533 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MMP2P08253 660 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FAHP16930 419 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 GGT1P19440 569 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FGF7P21781 194 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 RAB33AQ14088 237 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OXA1LQ15070 435 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DOHHQ9BU89 302 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 OSER1Q9NX31 292 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SERTAD3Q9UJW9 196 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC22A13Q9Y226 551 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 E5RGE8 158 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MANBAO00462 879 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 HIST1H1BP16401 226 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SPI1P17947 270 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 LIPJQ5W064 366 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DYRK2Q92630 601 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 EXT1Q16394 746 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 PCBD1P61457 104 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 OR11L1Q8NGX0 322 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC2A13Q96QE2 648 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 NELL2Q99435 816 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 MXRA8Q9BRK3 442 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC2A11Q9BYW1 496 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 PPP1R3CQ9UQK1 317 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 NFATC1O95644 943 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 ACVR1BP36896 505 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 TPMTP51580 245 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 UBE2MP61081 183 aaKnown RBP8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 HHEXQ03014 270 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 ATP6AP1Q15904 470 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 MANEAQ5SRI9 462 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 FSTL4Q6MZW2 842 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 CEACAM20Q6UY09 585 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 RABEPKQ7Z6M1 372 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 MON1AQ86VX9 555 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 UNC93AQ86WB7 457 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 B3GNT5Q9BYG0 378 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 KLK4Q9Y5K2 254 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 LILRB3O75022 631 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 CILPO75339 1184 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 NLGN4YQ8NFZ3 816 aaPredicted RBP8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 ZCCHC10Q8TBK6 192 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 MUL1Q969V5 352 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 PARD6AQ9NPB6 346 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 RCC2Q9P258 522 aaKnown RBP8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 SMIM6P0DI80 62 aa8.15□□□□□ -1.1
CACNA1C-220ENST00000399655 BTF3P20290 206 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms