RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TSPAN5P62079 268 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 TMEM81Q6P7N7 255 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 DPPA4Q7L190 304 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 UBE3DQ7Z6J8 389 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 LRRTM4Q86VH4 590 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 OR2T33Q8NG76 320 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 OR51Q1Q8NH59 317 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 RPLP0P6Q8NHW5 317 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 CAMK1GQ96NX5 476 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 DDOQ99489 341 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 AIF1LQ9BQI0 150 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 GSDMCQ9BYG8 508 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 ZCCHC2Q9C0B9 1178 aaKnown RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 PPA2Q9H2U2 334 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 TRIM36Q9NQ86 728 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 SPATA2Q9UM82 520 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 PDE4DIPQ5VU43 2346 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 J3QRE1 110 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 SLC9A3R1O14745 358 aaPredicted RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 HOXA2O43364 376 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 DRD2P14416 443 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 F8A1P23610 371 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 FPR3P25089 353 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 MMP12P39900 470 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 GARNL3Q5VVW2 1013 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 TMEM215Q68D42 235 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 ZNF547Q8IVP9 402 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 C17orf47Q8NEP4 570 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 TOR1AIP2Q8NFQ8 470 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 RHBGQ9H310 441 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 AUNIPQ9H7T9 357 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 FKBP7Q9Y680 259 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 RNF215Q9Y6U7 377 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 A0A0G2JPF8 293 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 HNRNPCL2B2RXH8 293 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 HNRNPCL3B7ZW38 293 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 OR1F1O43749 312 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 HNRNPCL4P0DMR1 293 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 BMP8BP34820 402 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 BLVRAP53004 296 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 C1orf53Q5VUE5 145 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 FAM122CQ6P4D5 195 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 BMP8AQ7Z5Y6 402 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 ABHD4Q8TB40 342 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 RGMAQ96B86 450 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 ERMAPQ96PL5 475 aaPredicted RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 MACROD1Q9BQ69 325 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 ORAI3Q9BRQ5 295 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 TRMT61BQ9BVS5 477 aaKnown RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 TMEM168Q9H0V1 697 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 POLMQ9NP87 494 aaPredicted RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 SLC35C2Q9NQQ7 365 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 LYARQ9NX58 379 aaKnown RBP13.04□□□□□ -0.32
APOB-202ENST00000399256 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
APOB-202ENST00000399256 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 THY1P04216 161 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 PEPDP12955 493 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 ACADLP28330 430 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 SSR2P43308 183 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 METAP1P53582 386 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 TAS2R38P59533 333 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
APOB-202ENST00000399256 BDH1Q02338 343 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 DUSP2Q05923 314 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 SNTB2Q13425 540 aaKnown RBP13.03□□□□□ -0.32
APOB-202ENST00000399256 ADIPOR2Q86V24 386 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 ACOT11Q8WXI4 607 aaPredicted RBP13.03□□□□□ -0.32
APOB-202ENST00000399256 THAP4Q8WY91 577 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 SCLYQ96I15 445 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 TTTY10Q9BZA0 68 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 C20orf85Q9H1P6 137 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 NFKBIL1Q9UBC1 381 aaPredicted RBP13.03□□□□□ -0.32
APOB-202ENST00000399256 PCYT1BQ9Y5K3 369 aaPredicted RBP13.03□□□□□ -0.32
APOB-202ENST00000399256 OBSL1O75147 1896 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 J3QLW9 94 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 PGRMC2O15173 223 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 SOD2P04179 222 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 ZNF19P17023 458 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 NDUFV2P19404 249 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 NTSP30990 170 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 RGS8P57771 180 aaPredicted RBP13.03□□□□□ -0.32
APOB-202ENST00000399256 SLC7A9P82251 487 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 SHC2P98077 582 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 HACD4Q5VWC8 232 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 NIPAL3Q6P499 406 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 Q6ZTK2 550 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 ADCK2Q7Z695 626 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 FGD2Q7Z6J4 655 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 ARHGDIGQ99819 225 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms