RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SDR9C7Q8NEX9 313 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 OR2L8Q8NGY9 312 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SNX33Q8WV41 574 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TRMT61AQ96FX7 289 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 TOX2Q96NM4 488 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 LRRC3BQ96PB8 259 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GPA33Q99795 319 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 BTBD1Q9H0C5 482 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GALNT9Q9HCQ5 603 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PLSCR3Q9NRY6 295 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 C17orf113A0A1B0GUU1 675 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRAMEF27A3QJZ7 478 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 EEF1E1O43324 174 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HPGDSO60760 199 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SLC19A2O60779 497 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 RPP14O95059 124 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ACP2P11117 423 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ACADLP28330 430 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PGDP52209 483 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 WNT4P56705 351 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 RHAGQ02094 409 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 MLLT11Q13015 90 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ILKQ13418 452 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF267Q14586 743 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNHIT3Q15649 155 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRSS58Q8IYP2 241 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 MFSD9Q8NBP5 474 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PROKR2Q8NFJ6 384 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HCAR2Q8TDS4 363 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 KCNJ15Q99712 375 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SLC6A20Q9NP91 592 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 MAP1BP46821 2468 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1W2PR48 441 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 URADA6NGE7 173 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 B4DGG1 531 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SMLR1H3BR10 107 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 LYRM1O43325 122 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 UBXN7O94888 489 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CTSEP14091 401 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 NDUFV2P19404 249 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PSMB10P40306 273 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 HCCSP53701 268 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 UBE2KP61086 200 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 POU6F2P78424 691 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SHC2P98077 582 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 EEF1A2Q05639 463 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRDX1Q06830 199 aaKnown RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CEACAM19Q7Z692 300 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 RANBP3LQ86VV4 465 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 FANK1Q8TC84 345 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 AP3S1Q92572 193 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 RERGQ96A58 199 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 MS4A6EQ96DS6 147 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 IRF2BPLQ9H1B7 796 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 UCKL1Q9NWZ5 548 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CPED1A4D0V7 1026 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 DUXAA6NLW8 204 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 A8MVJ9 347 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 AIPO00170 330 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 OR6A2O95222 327 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 PRR5P85299 388 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 INSL4Q14641 139 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 KANSL1Q7Z3B3 1105 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 GDF7Q7Z4P5 450 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 UBE3DQ7Z6J8 389 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 OR6C4Q8NGE1 309 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 OR51L1Q8NGJ5 315 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SMPDL3BQ92485 455 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF707Q96C28 371 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-202ENST00000398417 OR2M4Q96R27 311 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 CHIAQ9BZP6 476 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 A4GNTQ9UNA3 340 aa4.62□□□□□ -1.67
SMAD4-202ENST00000398417 SCN3AQ9NY46 2000 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 C5orf51A6NDU8 294 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 C12orf71A8MTZ7 269 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 B4GALT2O60909 372 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LDB3O75112 727 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SEMA3DO95025 777 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PIPP12273 146 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TYRP1P17643 537 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PVALBP20472 110 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NDUFS1P28331 727 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TSPAN31Q12999 210 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 DCST2Q5T1A1 773 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 FAM205BPQ63HN1 556 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ABHD17CQ6PCB6 329 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ABI3BPQ7Z7G0 1075 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LRRC56Q8IYG6 542 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TTLQ8NG68 377 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR2L5Q8NG80 312 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR8H1Q8NGG4 311 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CNRIP1Q96F85 164 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR52D1Q9H346 318 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MARK1Q9P0L2 795 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF443Q9Y2A4 671 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 EXOGQ9Y2C4 368 aaKnown RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 COLEC10Q9Y6Z7 277 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TRAV6A0A075B6T7 132 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TRAV27A0A087WT01 109 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MEIOCA2RUB1 952 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms