RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 GOLGA8RI6L899 631 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 TNFSF11O14788 317 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 RAMP1O60894 148 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 LY6HO94772 140 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PSMG1O95456 288 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 ANGPTL1O95841 491 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 IL3P08700 152 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 HSD3B1P14060 373 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PSMA4P25789 261 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 HSD3B2P26439 372 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PSMD4P55036 377 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF155Q12901 538 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 CSTF3Q12996 717 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 ITGADQ13349 1161 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 RNPS1Q15287 305 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 TSC22D1Q15714 1073 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 IQCCQ4KMZ1 466 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 SGO1Q5FBB7 561 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 TMEM201Q5SNT2 666 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 SH2D4BQ5SQS7 431 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PDSS1Q5T2R2 415 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 HBMQ6B0K9 141 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 C11orf71Q6IPW1 123 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 APOOLQ6UXV4 268 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 RINLQ6ZS11 566 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PEG10Q86TG7 708 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 CCDC25Q86WR0 208 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 TDRPQ86YL5 185 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 RNF128Q8TEB7 428 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF418Q8TF45 676 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 EXOSC8Q96B26 276 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 ZBTB8AQ96BR9 441 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 TRIM44Q96DX7 344 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PHF21BQ96EK2 531 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 RADILQ96JH8 1075 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 NSUN5Q96P11 429 aaKnown RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 PIMREGQ9BSJ6 248 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 METTL17Q9H7H0 456 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 Q9N2J8 555 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 SENP1Q9P0U3 644 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 KLHL13Q9P2N7 655 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 VPS29Q9UBQ0 182 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 SNX6Q9UNH7 406 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 C19orf53Q9UNZ5 99 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-203ENST00000397378 A0A096LPK6 155 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 HMX2A2RU54 273 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 TTC36A6NLP5 189 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 UTS2O95399 124 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 OTCP00480 354 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 ADAP00813 363 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 RPS17P08708 135 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 ME2P23368 584 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 STX2P32856 288 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 TTKP33981 857 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 RBMXP38159 391 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 NR4A2P43354 598 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 CARD18P57730 90 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 LGALS3BPQ08380 585 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 CALCOCO2Q13137 446 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 HEPACAMQ14CZ8 416 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF239Q16600 458 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 PLPPR5Q32ZL2 321 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 CPTPQ5TA50 214 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 MROH9Q5TGP6 573 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 LETMD1Q6P1Q0 360 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 Q6ZT83 130 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 BHLHA15Q7RTS1 189 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 NUFIP2Q7Z417 695 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 TRABD2AQ86V40 505 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 CREG2Q8IUH2 290 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 ACTRT2Q8TDY3 377 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 ABHD3Q8WU67 409 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 OSTF1Q92882 214 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 CPNE4Q96A23 557 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 REXO5Q96IC2 774 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 KLHL15Q96M94 604 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 RNF145Q96MT1 663 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 BBS4Q96RK4 519 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 NPAS1Q99742 590 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 LMF2Q9BU23 707 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF747Q9BV97 191 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 RBM4Q9BWF3 364 aaKnown RBP8.32□□□□□ -1.08
NEDD9-203ENST00000397378 CBLN4Q9NTU7 201 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 NFU1Q9UMS0 254 aa8.32□□□□□ -1.08
NEDD9-203ENST00000397378 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 A0A1W2PRB8 838 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 MYO1GB0I1T2 1018 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF814B7Z6K7 855 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 ALG1L2C9J202 215 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 H7C417 338 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 UPK1AO00322 258 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 ABCD4O14678 606 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 GMFGO60234 142 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 PCDH7O60245 1069 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 OPN1LWP04000 364 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 NGFRP08138 427 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 RBP1P09455 135 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 IFI6P09912 130 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms