RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LATO43561 262 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 NDUFA2O43678 99 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 HOXB3P14651 431 aaPredicted RBP22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 FUT5Q11128 374 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 AADACL4Q5VUY2 407 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 UXS1Q8NBZ7 420 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 NKIRAS2Q9NYR9 191 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 SESN1Q9Y6P5 492 aa22.4■■□□□ 1.18
CSNK1E-203ENST00000396832 RGS11O94810 467 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 ANKRD34CP0C6C1 535 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 HOXD10P28358 340 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 PPP2R1BP30154 601 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 DGCR2P98153 550 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 SP3Q02447 781 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 BTN2A1Q7KYR7 527 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 VRK2Q86Y07 508 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 MRGPRX3Q96LB0 322 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 DDOQ99489 341 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 DDX31Q9H8H2 851 aaKnown RBP22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 LIPT1Q9Y234 373 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 NPTNQ9Y639 398 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 KIAA1549LQ6ZVL6 1849 aa22.39■■□□□ 1.18
CSNK1E-203ENST00000396832 SNRNP200O75643 2136 aaKnown RBP22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 ANTXRLA6NF34 631 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 IGHA1P01876 353 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 UGT2B7P16662 529 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 TRIM23P36406 574 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 TPMTP51580 245 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 PCBP4P57723 403 aaKnown RBP22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 DEFB103AP81534 67 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 STK11Q15831 433 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 NDUFAF5Q5TEU4 345 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 C3P1Q6ZMU1 363 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 MS4A8Q9BY19 250 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 CHIAQ9BZP6 476 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 AHSPQ9NZD4 102 aa22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 EXOGQ9Y2C4 368 aaKnown RBP22.39■■□□□ 1.17
CSNK1E-203ENST00000396832 PI15O43692 258 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 PIP5K1CO60331 668 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 TFAP2EQ6VUC0 442 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 CCDC116Q8IYX3 515 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SMAP2Q8WU79 429 aaPredicted RBP22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SIPA1Q96FS4 1042 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 CXorf58Q96LI9 332 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 MED20Q9H944 212 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SLC23A2Q9UGH3 650 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SLC9B1P1A6NJY1 282 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SOCS6O14544 535 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 KIAA0355O15063 1070 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SCAMP1O15126 338 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 LCMT2O60294 686 aaKnown RBP22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 RAG2P55895 527 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 DUSP2Q05923 314 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 TCEA2Q15560 299 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 ZNF658BQ4V348 819 aaPredicted RBP22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 TCTE1Q5JU00 501 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 OR51G2Q8NGK0 314 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 GNPDA2Q8TDQ7 276 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 DTD2Q96FN9 168 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 FCRL4Q96PJ5 515 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SPHK2Q9NRA0 654 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 WASH3PC4AMC7 463 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 HMGN2P05204 90 aaKnown RBP22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 FUT1P19526 365 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SSR2P43308 183 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 MAPK9P45984 424 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 CLDN2P57739 230 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 RRM2BQ7LG56 351 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 OR56B4Q8NH76 319 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 MOSPD2Q8NHP6 518 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 PRRC1Q96M27 445 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 DPH7Q9BTV6 452 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 TTTY10Q9BZA0 68 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 XKR8Q9H6D3 395 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 IFT46Q9NQC8 304 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SEMA4GQ9NTN9 838 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 MARK1Q9P0L2 795 aa22.38■■□□□ 1.17
CSNK1E-203ENST00000396832 SLC22A23A1A5C7 686 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 LGALS8O00214 317 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 RIPPLY1Q0D2K3 151 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 SNTB2Q13425 540 aaKnown RBP22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 MTFR2Q6P444 385 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 RASSF6Q6ZTQ3 369 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 NKAIN4Q8IVV8 208 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 OR4Q3Q8NH05 313 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 DOK4Q8TEW6 326 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 NUS1Q96E22 293 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 CAPNS2Q96L46 248 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 HYAL3O43820 417 aaPredicted RBP22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 ALDOBP05062 364 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 NTHL1P78549 312 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 RGS7BPQ6MZT1 257 aaPredicted RBP22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 ING5Q8WYH8 240 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 TFGQ92734 400 aaPredicted RBP22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 MCCC2Q9HCC0 563 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 BRD7Q9NPI1 651 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 HRH3Q9Y5N1 445 aa22.37■■□□□ 1.17
CSNK1E-203ENST00000396832 SURF4O15260 269 aa22.36■■□□□ 1.17
CSNK1E-203ENST00000396832 NDUFS4O43181 175 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms